Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph Exome QC workflow

https://github.com/hamid58b/cancer-genomics-workflow.git

Path: qc/workflow_exome.cwl

Branch/Commit ID: master
workflow graph workflow.cwl

https://github.com/alexmieth/reana-demo-cms-h4l.git

Path: workflow/workflow.cwl

Branch/Commit ID: master
workflow graph pipeline_step4.cwl

https://github.com/Gibbsdavidl/CWL_scatter_example.git

Path: pipeline_step4.cwl

Branch/Commit ID: master
workflow graph predict-workflow.cwl

https://github.com/johnbradley/iMADS-worker.git

Path: predict_service/predict-workflow.cwl

Branch/Commit ID: master
workflow graph 03-map-pe-umis.cwl

STARR-seq 03 mapping - reads: PE

 https://github.com/alexbarrera/GGR-cwl.git

Path: v1.0/STARR-seq_pipeline/03-map-pe-umis.cwl

Branch/Commit ID: master
workflow graph dynresreq-workflow-tooldefault.cwl

https://github.com/common-workflow-language/cwl-v1.2.git

Path: tests/dynresreq-workflow-tooldefault.cwl

Branch/Commit ID: main
workflow graph 03-map-se.cwl

ATAC-seq 03 mapping - reads: SE

 https://github.com/Duke-GCB/GGR-cwl.git

Path: v1.0/ATAC-seq_pipeline/03-map-se.cwl

Branch/Commit ID: master
workflow graph stage_data_workflow.vcf_to_aliquot_maf.cwl

https://github.com/NCI-GDC/aliquot-maf-cwl.git

Path: vcf-to-aliquot-maf/subworkflows/stage_data_workflow.vcf_to_aliquot_maf.cwl

Branch/Commit ID: main
workflow graph zip_and_index_vcf.cwl

This is a very simple workflow of two steps. It will zip an input VCF file and then index it. The zipped file and the index file will be in the workflow output.

https://github.com/ICGC-TCGA-PanCancer/pcawg-snv-indel-annotation.git

Path: zip_and_index_vcf.cwl

Branch/Commit ID: 1.0.0
workflow graph wf_calculate_models2.cwl

https://github.com/idaks/cwl_modeling.git

Path: yw_cwl_modeling/calculate_models/wf_calculate_models2.cwl

Branch/Commit ID: master