Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	protein_extract	https://github.com/ncbi/pgap.git Path: progs/protein_extract.cwl Branch/Commit ID: 5ec226c941562124032ca6861bc8d1aeabf9d91a
	mergeAndMarkBams_4_1_3.cwl	https://github.com/PMCC-BioinformaticsCore/janis-pipelines.git Path: janis_pipelines/wgs_somatic/cwl/tools/mergeAndMarkBams_4_1_3.cwl Branch/Commit ID: db347697cbf46ed1d160d50666943bd56a2646f4
	Run genomic CMsearch (5S rRNA)	https://github.com/ncbi/pgap.git Path: bacterial_noncoding/wf_gcmsearch.cwl Branch/Commit ID: 5ec226c941562124032ca6861bc8d1aeabf9d91a
	GATK4_SomaticVariantCaller_4_1_3_0.cwl	https://github.com/PMCC-BioinformaticsCore/janis-pipelines.git Path: janis_pipelines/wgs_somatic/cwl/tools/GATK4_SomaticVariantCaller_4_1_3_0.cwl Branch/Commit ID: db347697cbf46ed1d160d50666943bd56a2646f4
	count-lines11-wf.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/count-lines11-wf.cwl Branch/Commit ID: 89ccbfc53ff3bb6abe2eb90bb7e0091c54c18f5c
	Exome QC workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/qc_exome.cwl Branch/Commit ID: e8b7759826df40b8bb821b40b15aea960a4951c4
	bam to trimmed fastqs and biscuit alignments	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/bam_to_trimmed_fastq_and_biscuit_alignments.cwl Branch/Commit ID: 42c66dd24ce5026d3f717214ddb18b7b4fae93cf
	virtus-recount.cwl	https://github.com/yyoshiaki/VIRTUS.git Path: workflow/virtus-recount.cwl Branch/Commit ID: 49687daefb8ae715386f722702755ffaa49283e6
	mergeAndMarkBams_4_1_3.cwl	https://github.com/PMCC-BioinformaticsCore/janis-pipelines.git Path: janis_pipelines/wgs_somatic/cwl/tools/mergeAndMarkBams_4_1_3.cwl Branch/Commit ID: c287ec74267425b1e70ee1f64b6219806c81779b
	kfdrc_bwamem_subwf.cwl	https://github.com/kids-first/kf-alignment-workflow.git Path: dev/ultra-opt/kfdrc_bwamem_subwf.cwl Branch/Commit ID: 140f20ca77430ec836f565fdecaf52a4cf935c6f