Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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oxog_sub_wf.cwl
This is a subworkflow of the main oxog_varbam_annotat_wf workflow - this is not meant to be run as a stand-alone workflow! |
https://github.com/icgc-tcga-pancancer/oxog-dockstore-tools.git
Path: oxog_sub_wf.cwl Branch/Commit ID: 1.0.0 |
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checker_workflow.cwl
Description of checker workflow here |
https://github.com/denis-yuen/dockstore-workflow-md5sum-unified.git
Path: checker_workflow.cwl Branch/Commit ID: 1.3.0 |
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tRNA_selection.cwl
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: tools/tRNA_selection.cwl Branch/Commit ID: 56dafa4 |
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Apply filters to VCF file
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https://github.com/litd/analysis-workflows.git
Path: definitions/subworkflows/germline_filter_vcf.cwl Branch/Commit ID: master |
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workflow_poster.cwl
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https://gitlab.ebrains.eu/sofiakar/yre-standardised-workflows.git
Path: Workflows/PSD_workflow_bucket_1/workflow_poster.cwl Branch/Commit ID: poster |
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samtools_view_sam2bam
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https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git
Path: structuralvariants/cwl/subworkflows/samtools_view_sam2bam.cwl Branch/Commit ID: 1.0.9 |
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wgs alignment with qc
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https://github.com/tmooney/cancer-genomics-workflow.git
Path: definitions/pipelines/alignment_wgs.cwl Branch/Commit ID: downsample_and_recall |
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preprocess.cwl
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https://github.com/Epigenomics-Screw/Screw.git
Path: cwl/preprocess.cwl Branch/Commit ID: master |
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QIIME2 Step 2 (Deblur option)
QIIME2 Deblur, feature summaries, phylogenetic diversity tree, taxonomic analysis and ancom |
https://github.com/Duke-GCB/bespin-cwl.git
Path: packed/qiime2-step2-deblur.cwl Branch/Commit ID: qiime2-workflow-paired Packed ID: main |
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RNASelector as a CWL workflow
https://doi.org/10.1007/s12275-011-1213-z |
https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: workflows/rna-selector.cwl Branch/Commit ID: master |
