Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph alignment_novoalign_multi_readgroup.cwl

https://github.com/uc-cdis/genomel_pipelines.git

Path: genomel/cwl/workflows/harmonization/alignment_novoalign_multi_readgroup.cwl

Branch/Commit ID: master
workflow graph wf_calculate_models.cwl

https://github.com/idaks/cwl_modeling.git

Path: yw_cwl_modeling/yw2cwl_parser/example_sql/calculate_models/wf_calculate_models.cwl

Branch/Commit ID: master
workflow graph chksum_xam_to_interleaved_fq.cwl

https://github.com/cancerit/workflow-seq-import.git

Path: cwls/chksum_xam_to_interleaved_fq.cwl

Branch/Commit ID: 0.5.0
workflow graph trimming-and-qc-no-upload.cwl

Use fastq file as input and do trimming and quality check. Quality checks are done before trimming and after trimming.

 https://github.com/ddbj/SAPPORO_test_workflow.git

Path: workflow/trimming-and-qc/trimming-and-qc-no-upload/trimming-and-qc-no-upload.cwl

Branch/Commit ID: master
workflow graph run-openfoam.cwl

https://github.com/chgarth/cwl-openfoam.git

Path: cwl/run-openfoam.cwl

Branch/Commit ID: main
workflow graph biscuit_multilib.cwl

https://github.com/CompEpigen/PipelineOlympics.git

Path: CWL/workflows/Biscuit/biscuit_multilib.cwl

Branch/Commit ID: main
workflow graph transform.cwl

https://github.com/denis-yuen/gdc-dnaseq-cwl.git

Path: workflows/dnaseq/transform.cwl

Branch/Commit ID: master
workflow graph Hello World

Outputs a message using echo

 https://github.com/YangYang-Lcos/legacy.git

Path: workflows/hello/hello-param.cwl

Branch/Commit ID: master
workflow graph workflow_demultiplexing.cwl

https://git.wageningenur.nl/unlock/cwl.git

Path: cwl/workflows/workflow_demultiplexing.cwl

Branch/Commit ID: master
workflow graph exomeseq-gatk4-00-prepare-reference-data.cwl

https://github.com/bespin-workflows/exomeseq-gatk4.git

Path: subworkflows/exomeseq-gatk4-00-prepare-reference-data.cwl

Branch/Commit ID: v2.0.3