Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph final-workflow.cwl

https://github.com/NAL-i5K/Organism_Onboarding.git

Path: final-workflow.cwl

Branch/Commit ID: master
workflow graph pipeline-fastq2vcf-multisample.cwl

DNAseq pipeline from fastq to vcf for multiple samples

 https://github.com/Sentieon/Sentieon-cwl.git

Path: pipeline/pipeline-fastq2vcf-multisample.cwl

Branch/Commit ID: master
workflow graph EMG pipeline v3.0 (paired end version)

https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git

Path: workflows/emg-pipeline-v3-paired.cwl

Branch/Commit ID: 5833078
workflow graph kf_alignment_fq_input_wf.cwl

https://github.com/cr-ste-justine/chujs-alignment-workflow.git

Path: workflows/kf_alignment_fq_input_wf.cwl

Branch/Commit ID: dev
workflow graph wf_get_peaks_se.cwl

https://github.com/YeoLab/eclip.git

Path: cwl/wf_get_peaks_se.cwl

Branch/Commit ID: master
workflow graph module-2

https://github.com/mskcc/roslin-variant.git

Path: setup/cwl/module-2.cwl

Branch/Commit ID: 2.4.x
workflow graph protein_extract

https://github.com/ncbi/pgap.git

Path: progs/protein_extract.cwl

Branch/Commit ID: dev
workflow graph bacteria-genome.cwl

DAT2-cwl bacteria genome data analysis workflow. see https://github.com/pitagora-network/DAT2-cwl/blob/main/workflow/bacteria-genome/README.md

 https://github.com/pitagora-network/DAT2-cwl.git

Path: workflow/bacteria-genome/bacteria-genome.cwl

Branch/Commit ID: main
workflow graph 01-qc-se.cwl

ChIP-seq 01 QC - reads: SE

 https://github.com/Duke-GCB/GGR-cwl.git

Path: v1.0/ChIP-seq_pipeline/01-qc-se.cwl

Branch/Commit ID: master
workflow graph scRNA-seq pipeline using Salmon and Alevin

https://github.com/hubmapconsortium/salmon-rnaseq.git

Path: pipeline.cwl

Branch/Commit ID: d18fd49