Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph fastq_foreign_chromosome_cleanup

This workflow remove foreign chromosome comtamination from blastn TSV files

 https://github.com/ncbi/cwl-ngs-workflows-cbb.git

Path: workflows/Contamination/fastq-foreign-chromosome-cleanup.cwl

Branch/Commit ID: master
workflow graph output-arrays-file-wf.cwl

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/output-arrays-file-wf.cwl

Branch/Commit ID: main
workflow graph tt_kmer_compare_wnode

Pairwise comparison

 https://github.com/ncbi/pgap.git

Path: task_types/tt_kmer_compare_wnode.cwl

Branch/Commit ID: master
workflow graph pz_workflow.cwl

https://github.com/EiffL/descpipe-cwl.git

Path: workflows/pz_workflow.cwl

Branch/Commit ID: master
workflow graph extract_gencoll_ids

https://github.com/ncbi/pgap.git

Path: task_types/tt_extract_gencoll_ids.cwl

Branch/Commit ID: dev
workflow graph LSU-from-tablehits.cwl

https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git

Path: tools/LSU-from-tablehits.cwl

Branch/Commit ID: master
workflow graph cnv_exomedepth

CNV ExomeDepth calling

https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git

Path: structuralvariants/cwl/subworkflows/cnv_exome_depth.cwl

Branch/Commit ID: 1.0.9
workflow graph process VCF workflow

https://github.com/hamid58b/cancer-genomics-workflow.git

Path: strelka/process_vcf.cwl

Branch/Commit ID: master
workflow graph panel of normals workflow

https://github.com/hamid58b/cancer-genomics-workflow.git

Path: panel_of_normals/workflow.cwl

Branch/Commit ID: master
workflow graph final_filtering

Final filtering

https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git

Path: structuralvariants/subworkflows/final_filtering.cwl

Branch/Commit ID: 3bb03c9b