Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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fastq2fasta.cwl
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https://github.com/hpobio-lab/viral-analysis.git
Path: cwl/fastq2fasta/fastq2fasta.cwl Branch/Commit ID: master |
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pcawg_annotate_wf.cwl
This workflow will run OxoG, variantbam, and annotate. Run this as `dockstore --script --debug workflow launch --descriptor cwl --local-entry --entry ./oxog_varbam_annotate_wf.cwl --json oxog_varbam_annotat_wf.input.json ` |
https://github.com/ICGC-TCGA-PanCancer/pcawg-snv-indel-annotation.git
Path: pcawg_annotate_wf.cwl Branch/Commit ID: develop |
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final_filtering
Final filtering |
https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git
Path: structuralvariants/cwl/subworkflows/final_filtering.cwl Branch/Commit ID: 1.1.3 |
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count-lines11-extra-step-wf.cwl
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https://github.com/common-workflow-language/cwl-v1.2.git
Path: tests/count-lines11-extra-step-wf.cwl Branch/Commit ID: main |
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5S-from-tablehits.cwl
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: tools/5S-from-tablehits.cwl Branch/Commit ID: 5dc7c5c |
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no-outputs-wf.cwl
Workflow without outputs. |
https://github.com/common-workflow-language/cwl-v1.1.git
Path: tests/no-outputs-wf.cwl Branch/Commit ID: main |
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SPRM pipeline
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https://github.com/hubmapconsortium/sprm.git
Path: pipeline.cwl Branch/Commit ID: d42d6f5 |
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test_workflow.cwl
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https://github.com/jniestroy/cwl_parser.git
Path: workflows/test_workflow.cwl Branch/Commit ID: master |
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mutect parallel workflow
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https://github.com/genome/cancer-genomics-workflow.git
Path: mutect/workflow.cwl Branch/Commit ID: toil_compatibility |
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word-mapping-dir.cwl#word-mapping-wf.cwl
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https://github.com/KBNLresearch/ochre.git
Path: ochre/cwl/word-mapping-dir.cwl Branch/Commit ID: master Packed ID: word-mapping-wf.cwl |
