Explore Workflows
View already parsed workflows here or click here to add your own
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Whole Exome Sequencing
Whole Exome Sequence analysis using GATK best practices - Germline SNP & Indel Discovery |
Path: packed/exomeseq.cwl Branch/Commit ID: qiime2-workflow Packed ID: main |
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qiime2 explore sample taxonomic composition
Taxonomic analysis from https://docs.qiime2.org/2018.4/tutorials/moving-pictures/ |
Path: packed/qiime2-step2-dada2.cwl Branch/Commit ID: qiime2-workflow Packed ID: qiime2-08-taxonomic-analysis.cwl |
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md5-validate.cwl
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Path: cwl_awsem_v1/md5-validate.cwl Branch/Commit ID: dev2 |
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msa_group_compare.cwl
This workflow compares two groups of sequences by running two steps: \n 1. a MSA aligment to calculate a distance matrix \n 2. generate and plot a phylogenetic tree annotated by group labels \n \n For more information please see: \n https://w3id.org/cwl/view/git/5227e2c45be641c6675c0a24a8b1f72d712fac40/CWL/workflows/msa_group_compare.cwl |
Path: CWL/workflows/msa_group_compare.cwl Branch/Commit ID: master |
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sum-wf.cwl
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Path: tests/sum-wf.cwl Branch/Commit ID: master |
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wf-loadContents.cwl
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Path: tests/wf-loadContents.cwl Branch/Commit ID: main |
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exomeseq-gatk4-preprocessing/v2.0.3
Whole Exome Sequence preprocessing using GATK4 - v2.0.3 |
Path: exomeseq-gatk4-preprocessing.cwl Branch/Commit ID: v2.0.3 |
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rhapsody_wta_1.8.cwl#UncompressDatatables.cwl
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Path: v1.8/rhapsody_wta_1.8.cwl Branch/Commit ID: master Packed ID: UncompressDatatables.cwl |
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sc_atac_seq_prep_process_init.cwl
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Path: steps/sc_atac_seq_prep_process_init.cwl Branch/Commit ID: 3da5dd0 |
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pipeline.cwl
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Path: pipeline.cwl Branch/Commit ID: a5b2aa9 |
