Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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SSU-from-tablehits.cwl
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: tools/SSU-from-tablehits.cwl Branch/Commit ID: 43d2fb8 |
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Chipseq alignment with qc and creating homer tag directory
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https://github.com/tmooney/cancer-genomics-workflow.git
Path: definitions/pipelines/chipseq.cwl Branch/Commit ID: downsample_and_recall |
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bwameth_singlelib.cwl
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https://github.com/ifishlin/Benchmarking_CWL.git
Path: workflows/bwameth/bwameth_singlelib.cwl Branch/Commit ID: main |
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word-mapping-test-files-wf.cwl#align-texts-wf.cwl
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https://github.com/kbnlresearch/ochre.git
Path: ochre/cwl/word-mapping-test-files-wf.cwl Branch/Commit ID: master Packed ID: align-texts-wf.cwl |
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step-valuefrom4-wf.cwl
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https://github.com/common-workflow-language/cwl-v1.1.git
Path: tests/step-valuefrom4-wf.cwl Branch/Commit ID: master |
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Subworkflow to allow calling different SV callers which require bam files as inputs
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https://github.com/fgomez02/analysis-workflows.git
Path: definitions/subworkflows/single_sample_sv_callers.cwl Branch/Commit ID: No_filters_detect_variants |
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functional analysis prediction with InterProScan
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: workflows/functional_analysis.cwl Branch/Commit ID: 5e82174 |
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full_workflow_notcompact.cwl
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https://github.com/teoloup/cwltools.git
Path: full_workflow_notcompact.cwl Branch/Commit ID: master |
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minibam_sub_wf.cwl
This is a subworkflow of the main oxog_varbam_annotat_wf workflow - this is not meant to be run as a stand-alone workflow! |
https://github.com/icgc-tcga-pancancer/pcawg-minibam.git
Path: minibam_sub_wf.cwl Branch/Commit ID: master |
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cnv_exomedepth
CNV ExomeDepth calling |
https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git
Path: structuralvariants/cwl/subworkflows/cnv_exome_depth.cwl Branch/Commit ID: 1.0.5 |
