Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph wf-alignment.cwl

https://github.com/FarahZKhan/bcbio_test_cwl.git

Path: somatic/somatic-workflow/wf-alignment.cwl

Branch/Commit ID: master
workflow graph EMG assembly for paired end Illumina

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/emg-assembly.cwl

Branch/Commit ID: 3f85843
workflow graph preprocess_vcf.cwl

This workflow will perform preprocessing steps on VCFs for the OxoG/Variantbam/Annotation workflow.

https://github.com/ICGC-TCGA-PanCancer/OxoG-Dockstore-Tools.git

Path: preprocess_vcf.cwl

Branch/Commit ID: 1.0.0
workflow graph status_postgres_workflow.cwl

https://github.com/NCI-GDC/gdc-dnaseq-cwl.git

Path: workflows/status/status_postgres_workflow.cwl

Branch/Commit ID: 1.1
workflow graph 05-quantification-with-control.cwl

ChIP-seq - Quantification - samples: treatment and control

 https://github.com/alexbarrera/GGR-cwl.git

Path: v1.0/ChIP-seq_pipeline/05-quantification-with-control.cwl

Branch/Commit ID: master
workflow graph emblem_textures.cwl

https://gitlab.com/unduthegun/stellaris-emblem-lab.git

Path: textures/emblem_textures.cwl

Branch/Commit ID: cwl
workflow graph STAR-RNA-Seq alignment and transcript/gene abundance workflow with Xenosplit

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/rnaseq_star_fusion_with_xenosplit.cwl

Branch/Commit ID: master
workflow graph methylCtools_singlelib.cwl

https://github.com/ifishlin/Benchmarking_CWL.git

Path: workflows/methylCtools/methylCtools_singlelib.cwl

Branch/Commit ID: main
workflow graph alignment_prep.cwl

https://github.com/uc-cdis/genomel_pipelines.git

Path: genomel/cwl/workflows/harmonization/alignment_prep.cwl

Branch/Commit ID: master
workflow graph any-type-compat.cwl

https://github.com/common-workflow-language/cwl-v1.2.git

Path: tests/any-type-compat.cwl

Branch/Commit ID: main