Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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env-wf2.cwl
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https://github.com/common-workflow-language/cwl-v1.1.git
Path: tests/env-wf2.cwl Branch/Commit ID: main |
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align-test-files-pack.cwl#main
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https://github.com/KBNLresearch/ochre.git
Path: ochre/cwl/align-test-files-pack.cwl Branch/Commit ID: master Packed ID: main |
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pipeline.cwl
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https://github.com/hubmapconsortium/create-vis-symlink-archive.git
Path: pipeline.cwl Branch/Commit ID: 6e55233 |
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idr.cwl
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https://github.com/ncbi/cwl-ngs-workflows-cbb.git
Path: workflows/ChIP-Seq/idr.cwl Branch/Commit ID: master |
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qiime2 explore sample taxonomic composition
Taxonomic analysis from https://docs.qiime2.org/2018.4/tutorials/moving-pictures/ |
https://github.com/duke-gcb/bespin-cwl.git
Path: packed/qiime2-step2-dada2-paired.cwl Branch/Commit ID: qiime2-workflow-paired Packed ID: qiime2-08-taxonomic-analysis.cwl |
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echo-wc_inline.cwl
Counts words of a message via echo and wc |
https://github.com/NLeSC/scriptcwl.git
Path: tests/data/workflows/echo-wc_inline.cwl Branch/Commit ID: master |
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step2: trimming fastq files (paired-end)
multiple fastq files trimming process using fastp version 0.23.4 and scatter feature requirement |
https://github.com/RyoNozu/CWL4IncorporateTSSintoGXF.git
Path: workflow/01_trimming_fastq_subworkflow_pe.cwl Branch/Commit ID: main |
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EMG assembly for paired end Illumina
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https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git
Path: workflows/emg-assembly.cwl Branch/Commit ID: f993cad |
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checker_workflow_wrapping_tool.cwl
This demonstrates how to wrap a \"real\" tool with a checker workflow that runs both the tool and a tool that performs verification of results |
https://github.com/dockstore-testing/dockstore-workflow-md5sum-unified.git
Path: checker_workflow_wrapping_tool.cwl Branch/Commit ID: develop |
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workflow.cwl
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https://github.com/NAL-i5K/Organism_Onboarding.git
Path: flow_dispatch/2other_species/workflow.cwl Branch/Commit ID: master |
