Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	realign-distr.cwl	https://github.com/sentieon/sentieon-cwl.git Path: stage/realign-distr.cwl Branch/Commit ID: master
	exomeseq-gatk4-00-prepare-reference-data.cwl	https://github.com/bespin-workflows/exomeseq-gatk4.git Path: subworkflows/exomeseq-gatk4-00-prepare-reference-data.cwl Branch/Commit ID: v2.0.3
	EMG assembly for paired end Illumina	https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git Path: workflows/emg-assembly.cwl Branch/Commit ID: ca6ca613
	workflow-blast-clustalo-phylogeny.cwl	https://github.com/ebi-jdispatcher/webservice-cwl.git Path: workflows/workflow-blast-clustalo-phylogeny.cwl Branch/Commit ID: master
	Subworkflow that runs cnvkit in single sample mode and returns a vcf file	https://github.com/apaul7/cancer-genomics-workflow.git Path: definitions/subworkflows/cnvkit_single_sample.cwl Branch/Commit ID: low-vaf
	TransDecoder 2 step workflow, running TransDecoder.LongOrfs (step 1) followed by TransDecoder.Predict (step2)	https://github.com/mr-c/workflow-is-cwl.git Path: workflows/TransDecoder-v5-wf-2steps.cwl Branch/Commit ID: fix_sbg_namespace
	trimmed_fastq Quality Control (raw data), Raw Data trimming and Quality Control (pre-processed)	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/cwl/subworkflows/trimmed_fastq.cwl Branch/Commit ID: 1.0.6
	indexing_bed	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/cwl/subworkflows/indexing_bed.cwl Branch/Commit ID: 1.1.3
	collate_unique_rRNA_headers.cwl	https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git Path: tools/collate_unique_rRNA_headers.cwl Branch/Commit ID: 8e196ab
	01-qc-pe.cwl RNA-seq 01 QC - reads: PE	https://github.com/Duke-GCB/GGR-cwl.git Path: v1.0/RNA-seq_pipeline/01-qc-pe.cwl Branch/Commit ID: master

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