Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph Tumor-Only Detect Variants workflow

https://github.com/apaul7/cancer-genomics-workflow.git

Path: definitions/pipelines/tumor_only_detect_variants.cwl

Branch/Commit ID: low-vaf
workflow graph wgs alignment and somatic variant detection

https://github.com/apaul7/cancer-genomics-workflow.git

Path: definitions/pipelines/somatic_wgs_nonhuman.cwl

Branch/Commit ID: low-vaf
workflow graph ValidateCameraPlateScale

Validate camera plate scale

 https://github.com/gammasim/workflows.git

Path: workflows/ValidateCameraPlateScale.cwl

Branch/Commit ID: main
workflow graph batch-preprocess-ont.cwl

https://github.com/fjrmoreews/cwl-workflow-SARS-CoV-2.git

Path: PreProcessing/batch-preprocess-ont.cwl

Branch/Commit ID: master
workflow graph SPRM pipeline

https://github.com/hubmapconsortium/sprm.git

Path: pipeline.cwl

Branch/Commit ID: 0cb2efa
workflow graph fireprot.cwl

https://github.com/CERIT-SC/fireprot.git

Path: fireprot.cwl

Branch/Commit ID: master
workflow graph oxog_sub_wf.cwl

This is a subworkflow of the main oxog_varbam_annotat_wf workflow - this is not meant to be run as a stand-alone workflow!

https://github.com/ICGC-TCGA-PanCancer/OxoG-Dockstore-Tools.git

Path: oxog_sub_wf.cwl

Branch/Commit ID: master
workflow graph hydromt-build-workflow.cwl#hydromt-workflow

https://github.com/jzvolensky/Itwin-tech-meeting.git

Path: example/hydromt/cwl/hydromt-build-workflow.cwl

Branch/Commit ID: main

Packed ID: hydromt-workflow
workflow graph bqsr_workflow.cwl

https://github.com/andurill/ACCESS-Pipeline.git

Path: workflows/BQSR/bqsr_workflow.cwl

Branch/Commit ID: master
workflow graph spiel.cwl

https://github.com/gijzelaerr/spiel.git

Path: spiel.cwl

Branch/Commit ID: tutorial