Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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no-outputs-wf.cwl
Workflow without outputs. |
https://github.com/common-workflow-language/cwl-v1.1.git
Path: tests/no-outputs-wf.cwl Branch/Commit ID: master |
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cram_to_bam workflow
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https://github.com/fgomez02/analysis-workflows.git
Path: definitions/subworkflows/cram_to_bam_and_index.cwl Branch/Commit ID: No_filters_detect_variants |
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Produce a list of residue-mapped structural domain instances from CATH ids
Retrieve and process the PDB structures corresponding to the CATH superfamily ids resulting in a list of residue-mapped structural domain instances along with lost structural instances (requires Data/cath_domain_description_file.txt downloaded from CATH and uses SIFTS resource for PDB to UniProt residue Mapping) |
https://github.com/HrishiDhondge/CroMaSt.git
Path: Tools/resmapping_cath_instances_subwf.cwl Branch/Commit ID: main |
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pindel parallel workflow
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https://github.com/hamid58b/cancer-genomics-workflow.git
Path: pindel/workflow.cwl Branch/Commit ID: master |
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step_valuefrom5_wf_v1_0.cwl
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https://github.com/common-workflow-language/cwl-utils.git
Path: testdata/step_valuefrom5_wf_v1_0.cwl Branch/Commit ID: main |
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wf-variantcall.cwl
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https://github.com/FarahZKhan/bcbio_test_cwlprov.git
Path: somatic/somatic-workflow/wf-variantcall.cwl Branch/Commit ID: master |
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Perform SV calling of sample vs matched control using Delly, Lumpy, and Manta
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https://github.com/ChrisMaherLab/PACT.git
Path: subworkflows/sv_caller.cwl Branch/Commit ID: master |
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align-dir-pack.cwl#align-texts-wf.cwl
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https://github.com/KBNLresearch/ochre.git
Path: ochre/cwl/align-dir-pack.cwl Branch/Commit ID: master Packed ID: align-texts-wf.cwl |
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hc-distr.cwl
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https://github.com/Sentieon/Sentieon-cwl.git
Path: stage/hc-distr.cwl Branch/Commit ID: master |
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structural-variants-pair.cwl
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https://github.com/mskcc/roslin-cwl.git
Path: modules/pair/structural-variants-pair.cwl Branch/Commit ID: master |
