Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph Pipeline for evaluating differential expression of genes across datasets

https://github.com/hubmapconsortium/rna-data-products.git

Path: pipeline.cwl

Branch/Commit ID: main
workflow graph count-lines8-wf.cwl

https://github.com/common-workflow-language/common-workflow-language.git

Path: v1.0/v1.0/count-lines8-wf.cwl

Branch/Commit ID: master
workflow graph exomeseq.cwl#exomeseq-02-variantdiscovery.cwl

https://github.com/Duke-GCB/bespin-cwl.git

Path: packed/exomeseq.cwl

Branch/Commit ID: qiime2-workflow

Packed ID: exomeseq-02-variantdiscovery.cwl
workflow graph RNASelector as a CWL workflow

https://doi.org/10.1007/s12275-011-1213-z

 https://github.com/proteinswebteam/ebi-metagenomics-cwl.git

Path: workflows/rna-selector.cwl

Branch/Commit ID: caea457
workflow graph Apply filters to VCF file

https://github.com/litd/analysis-workflows.git

Path: definitions/subworkflows/germline_filter_vcf.cwl

Branch/Commit ID: master
workflow graph realign-distr.cwl

https://github.com/sentieon/sentieon-cwl.git

Path: stage/realign-distr.cwl

Branch/Commit ID: master
workflow graph exomeseq-gatk4-00-prepare-reference-data.cwl

https://github.com/bespin-workflows/exomeseq-gatk4.git

Path: subworkflows/exomeseq-gatk4-00-prepare-reference-data.cwl

Branch/Commit ID: v2.0.3
workflow graph EMG assembly for paired end Illumina

https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git

Path: workflows/emg-assembly.cwl

Branch/Commit ID: ca6ca613
workflow graph workflow-blast-clustalo-phylogeny.cwl

https://github.com/ebi-jdispatcher/webservice-cwl.git

Path: workflows/workflow-blast-clustalo-phylogeny.cwl

Branch/Commit ID: master
workflow graph Subworkflow that runs cnvkit in single sample mode and returns a vcf file

https://github.com/apaul7/cancer-genomics-workflow.git

Path: definitions/subworkflows/cnvkit_single_sample.cwl

Branch/Commit ID: low-vaf