Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	bulk-atac-seq-pipeline.cwl	https://github.com/hubmapconsortium/sc-atac-seq-pipeline.git Path: bulk-atac-seq-pipeline.cwl Branch/Commit ID: 3da5dd0
	Run pindel on provided region	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/pindel_region.cwl Branch/Commit ID: master
	STAR-RNA-Seq alignment and transcript/gene abundance workflow with Xenosplit	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/rnaseq_star_fusion_with_xenosplit.cwl Branch/Commit ID: master
	ValidateArrayElementCoordinates Plot and compare array element coordinates. Validate coordinate transformation from those used in observatory database to simulation systems.	https://github.com/gammasim/workflows.git Path: workflows/ValidateArrayElementCoordinates.cwl Branch/Commit ID: main
	Runs InterProScan on batches of sequences to retrieve functional annotations.	https://github.com/stain/workflow-is-cwl.git Path: workflows/InterProScan-v5-chunked-wf.cwl Branch/Commit ID: avoid-spaces
	main-giab-joint.cwl	https://github.com/bcbio/bcbio_validation_workflows.git Path: giab-joint/giab-joint-workflow/main-giab-joint.cwl Branch/Commit ID: master
	SSU-from-tablehits.cwl	https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git Path: tools/SSU-from-tablehits.cwl Branch/Commit ID: e1b0fce
	preparation_workflow.cwl	https://github.com/NCI-GDC/gatk4_mutect2_cwl.git Path: utils-cwl/subworkflow/preparation_workflow.cwl Branch/Commit ID: master
	pass-unconnected.cwl	https://github.com/common-workflow-language/cwl-v1.1.git Path: tests/pass-unconnected.cwl Branch/Commit ID: master
	Decompress Decompress mate pair fastq files	https://github.com/MG-RAST/amplicon.git Path: CWL/Workflows/decompress_mate_pair.workflow.cwl Branch/Commit ID: master

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