Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	Transcriptome assembly workflow (paired-end version)	https://github.com/mscheremetjew/workflow-is-cwl.git Path: workflows/TranscriptomeAssembly-wf.paired-end.cwl Branch/Commit ID: master
	Transcriptome assembly workflow (single-end version)	https://github.com/mscheremetjew/workflow-is-cwl.git Path: workflows/TranscriptomeAssembly-wf.single-end.cwl Branch/Commit ID: assembly
	exome alignment with qc, no bqsr, no verify_bam_id	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/alignment_exome_nonhuman.cwl Branch/Commit ID: master
	running cellranger mkfastq and count	https://github.com/tmooney/cancer-genomics-workflow.git Path: definitions/subworkflows/cellranger_mkfastq_and_count.cwl Branch/Commit ID: downsample_and_recall
	bam to trimmed fastqs	https://github.com/tmooney/cancer-genomics-workflow.git Path: definitions/subworkflows/bam_to_trimmed_fastq.cwl Branch/Commit ID: downsample_and_recall
	align-dir-pack.cwl#align-texts-wf.cwl	https://github.com/KBNLresearch/ochre.git Path: ochre/cwl/align-dir-pack.cwl Branch/Commit ID: master Packed ID: align-texts-wf.cwl
	main-giab-chm.cwl	https://github.com/bcbio/bcbio_validation_workflows.git Path: giab-chm/giab-chm-workflow/main-giab-chm.cwl Branch/Commit ID: master
	MEME motif This workflow uses MEME suite for motif finding	https://github.com/ncbi/cwl-ngs-workflows-cbb.git Path: workflows/ChIP-Seq/meme-motif.cwl Branch/Commit ID: master
	rRNA_selection.cwl	https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git Path: tools/rRNA_selection.cwl Branch/Commit ID: 6c856cd
	FASTQ Vector Removal This workflow convert fastq to multiple fasta files	https://github.com/ncbi/cwl-ngs-workflows-cbb.git Path: workflows/File-formats/fastq-to-splitted-fasta.cwl Branch/Commit ID: master

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