Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph rmats_wf.cwl

https://github.com/kids-first/kf-rnaseq-workflow.git

Path: workflow/rmats_wf.cwl

Branch/Commit ID: master
workflow graph echo-wc.cwl

Counts words of a message via echo and wc

 https://github.com/NLeSC/scriptcwl.git

Path: tests/data/workflows/echo-wc.cwl

Branch/Commit ID: master
workflow graph wf_get_peaks_scatter_se_nostats.cwl

The \"main\" workflow. Takes fastq files generated using the seCLIP protocol (https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5991800/) and outputs candidate RBP binding regions (peaks). runs: wf_get_peaks_se.cwl through scatter across multiple samples.

https://github.com/YeoLab/eclip.git

Path: cwl/wf_get_peaks_scatter_se_nostats.cwl

Branch/Commit ID: master
workflow graph Tumor-Only Detect Variants workflow

https://github.com/genome/cancer-genomics-workflow.git

Path: detect_variants/tumor_only_detect_variants.cwl

Branch/Commit ID: toil_compatibility
workflow graph ST520110.cwl

https://github.com/Marco-Salvi/cwl-ro-crate.git

Path: ST520110.cwl

Branch/Commit ID: main
workflow graph extract other ncrnas!

https://github.com/EBI-Metagenomics/pipeline-v5.git

Path: workflows/subworkflows/other_ncrnas.cwl

Branch/Commit ID: master
workflow graph wf_gen_paleocar_model3.cwl

https://github.com/idaks/cwl_modeling.git

Path: yw_cwl_modeling/gen_paleocar_models/wf_gen_paleocar_model3.cwl

Branch/Commit ID: master
workflow graph EMG pipeline v3.0 (single end version)

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/emg-pipeline-v3.cwl

Branch/Commit ID: master
workflow graph viralrecon.nanopore.packed.cwl#viralrecon.nanopore.single.cwl

https://github.com/inutano/viralrecon-cwl.git

Path: nanopore/workflow/viralrecon.nanopore.packed.cwl

Branch/Commit ID: development

Packed ID: viralrecon.nanopore.single.cwl
workflow graph An example tool demonstrating workflows.

Note that this is an example and the metadata is not necessarily consistent.

 https://github.com/eritema/cwlExamples.git

Path: Example15/ex15.cwl

Branch/Commit ID: master