Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph workflow.cwl

https://github.com/nal-i5k/organism_onboarding.git

Path: flow_download/workflow.cwl

Branch/Commit ID: master
workflow graph Subworkflow that runs cnvkit in single sample mode and returns a vcf file

https://github.com/fgomez02/analysis-workflows.git

Path: definitions/subworkflows/cnvkit_single_sample.cwl

Branch/Commit ID: No_filters_detect_variants
workflow graph Subworkflow to allow calling different SV callers which require bam files as inputs

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/single_sample_sv_callers.cwl

Branch/Commit ID: master
workflow graph EMG pipeline v3.0 (single end version)

https://github.com/proteinswebteam/ebi-metagenomics-cwl.git

Path: workflows/emg-pipeline-v3.cwl

Branch/Commit ID: 0cd2d70
workflow graph import_include_test.cwl

https://github.com/wshands/CWL1.2Test.git

Path: import_include_test.cwl

Branch/Commit ID: develop
workflow graph vecscreen_and_filter_workflow.cwl

https://github.com/sapojnik/av_screen_x.git

Path: progs/vecscreen_and_filter_workflow.cwl

Branch/Commit ID: main
workflow graph Create Genomic Collection for Bacterial Pipeline

https://github.com/slottad/pgap.git

Path: genomic_source/wf_genomic_source.cwl

Branch/Commit ID: master
workflow graph msa_group_compare.cwl

This workflow compares two groups of sequences by running two steps: \n 1. a MSA aligment to calculate a distance matrix \n 2. generate and plot a phylogenetic tree annotated by group labels \n \n For more information please see: \n https://w3id.org/cwl/view/git/5227e2c45be641c6675c0a24a8b1f72d712fac40/CWL/workflows/msa_group_compare.cwl

https://github.com/CompEpigen/msa_group_compare.git

Path: CWL/workflows/msa_group_compare.cwl

Branch/Commit ID: master
workflow graph rp2-to-rp2path.cwl

https://github.com/ibisba/test-cwl.git

Path: workflows/rp2-to-rp2path.cwl

Branch/Commit ID: master
workflow graph bacterial_orthology_cond

https://github.com/ncbi/pgap.git

Path: bacterial_orthology/wf_bacterial_orthology_conditional.cwl

Branch/Commit ID: test