Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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qiime2 demux sequences
Demultiplexing sequences from https://docs.qiime2.org/2018.4/tutorials/moving-pictures/ |
https://github.com/Duke-GCB/bespin-cwl.git
Path: packed/qiime2-step1-import-demux.cwl Branch/Commit ID: qiime2-workflow Packed ID: qiime2-02-demux.cwl |
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bwameth_mulitlib.cwl
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https://github.com/ifishlin/Benchmarking_CWL.git
Path: workflows/bwameth/bwameth_mulitlib.cwl Branch/Commit ID: main |
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sc_atac_seq_prep_process_init.cwl
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https://github.com/hubmapconsortium/multiome-rna-atac-pipeline.git
Path: sc-atac-seq-pipeline/steps/sc_atac_seq_prep_process_init.cwl Branch/Commit ID: 68e0cc1 |
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animal-genome-assembly.cwl
Animal Genome Assembly pipeline by Kazuharu Arakawa (@gaou_ak) without assembly step by canu, CWLized by Tazro Ohta (@inutano) |
https://github.com/pitagora-network/DAT2-cwl.git
Path: workflow/animal-genome-assembly/animal-genome-assembly.cwl Branch/Commit ID: main |
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trim_and_map.cwl
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https://github.com/CompEpigen/ChIPseq_workflows.git
Path: CWL/workflow_modules/trim_and_map.cwl Branch/Commit ID: master |
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calculate_contamination_workflow.cwl
GATK4.1.2 Calculate tumor-normal contamination workflow |
https://github.com/NCI-GDC/gatk4_mutect2_cwl.git
Path: subworkflows/calculate_contamination_workflow.cwl Branch/Commit ID: master |
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chksum_seqval_wf_paired_fq.cwl
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https://github.com/cancerit/workflow-seq-import.git
Path: cwls/chksum_seqval_wf_paired_fq.cwl Branch/Commit ID: 0.2.3 |
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chksum_seqval_wf_paired_fq.cwl
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https://github.com/cancerit/workflow-seq-import.git
Path: cwls/chksum_seqval_wf_paired_fq.cwl Branch/Commit ID: 0.3.0 |
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chksum_seqval_wf_interleaved_fq.cwl
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https://github.com/cancerit/workflow-seq-import.git
Path: cwls/chksum_seqval_wf_interleaved_fq.cwl Branch/Commit ID: 0.3.0 |
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chksum_seqval_wf_interleaved_fq.cwl
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https://github.com/cancerit/workflow-seq-import.git
Path: cwls/chksum_seqval_wf_interleaved_fq.cwl Branch/Commit ID: 0.2.3 |
