Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph TransDecoder 2 step workflow, running TransDecoder.LongOrfs (step 1) followed by TransDecoder.Predict (step2)

https://github.com/EBI-Metagenomics/workflow-is-cwl.git

Path: workflows/TransDecoder-v5-wf-2steps.cwl

Branch/Commit ID: assembly
workflow graph genomics-workspace-transcript.cwl

https://github.com/NAL-i5K/Organism_Onboarding.git

Path: flow_genomicsWorkspace/genomics-workspace-transcript.cwl

Branch/Commit ID: master
workflow graph flagging.cwl

https://github.com/ska-sa/den.git

Path: cwl/workflows/flagging.cwl

Branch/Commit ID: kat7-test
workflow graph gp_makeblastdb

https://github.com/ncbi/pgap.git

Path: progs/gp_makeblastdb.cwl

Branch/Commit ID: dev
workflow graph qa_check_subwf.cwl

This subworkflow will perform a QA check on the OxoG outputs. It will perform the QA check on a single tumour and it associated VCFs

https://github.com/ICGC-TCGA-PanCancer/OxoG-Dockstore-Tools.git

Path: qa_check_subwf.cwl

Branch/Commit ID: develop
workflow graph output.cwl

https://github.com/CERIT-SC/fireprot.git

Path: output.cwl

Branch/Commit ID: master
workflow graph vqsr-flow.cwl

run vqsr flow, including vqsr rcal, vqsr apply and plot

 https://github.com/sentieon/sentieon-cwl.git

Path: stage/vqsr-flow.cwl

Branch/Commit ID: master
workflow graph Resize sentinel2ard collection

Resize sentinel2ard collection

 https://github.com/EO-DataHub/eodh-training.git

Path: cwl/resize-sentinel2ard.cwl

Branch/Commit ID: main

Packed ID: resize-sentinel2ard
workflow graph mast.cwl

https://github.com/alahiff/fastwf.git

Path: mast.cwl

Branch/Commit ID: master
workflow graph vecscreen.cwl

https://github.com/ncbi/pgap.git

Path: vecscreen/vecscreen.cwl

Branch/Commit ID: test