Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph cmsearch-multimodel.cwl

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/cmsearch-multimodel.cwl

Branch/Commit ID: 0cd2d70
workflow graph 5S-from-tablehits.cwl

https://github.com/proteinswebteam/ebi-metagenomics-cwl.git

Path: tools/5S-from-tablehits.cwl

Branch/Commit ID: 5dc7c5c
workflow graph gdc_main_annotation_workflow.cwl

https://github.com/NCI-GDC/vep-cwl.git

Path: v102/workflows/subworkflows/gdc_main_annotation_workflow.cwl

Branch/Commit ID: master
workflow graph Dockstore.cwl

https://github.com/GA4GH-DREAM/dockstore-workflow-helloworld.git

Path: Dockstore.cwl

Branch/Commit ID: 1.0.0
workflow graph Chunked version of phmmer-v3.2.cwl

https://github.com/EBI-Metagenomics/workflow-is-cwl.git

Path: workflows/phmmer-v3.2-chunked-wf.cwl

Branch/Commit ID: master
workflow graph download_quality_control_single_rename_spot.cwl

https://github.com/ncbi/cwl-ngs-workflows-cbb.git

Path: workflows/sra/download_quality_control_single_rename_spot.cwl

Branch/Commit ID: master
workflow graph validate_interleaved_fq.cwl

https://github.com/cancerit/workflow-seq-import.git

Path: cwls/validate_interleaved_fq.cwl

Branch/Commit ID: master
workflow graph Dockstore.cwl

Testing: align sequences with bwa mem, then convert ot BAM

 https://github.com/standage/FirstCWLWorkflow.git

Path: Dockstore.cwl

Branch/Commit ID: master
workflow graph rnaseq-alignment-quantification

This workflow retrieve SRA fastqc data and execute QC, alignment and quantification from TPMCalculator

 https://github.com/ncbi/cwl-ngs-workflows-cbb.git

Path: workflows/RNA-Seq/rnaseq-quantification-qc.cwl

Branch/Commit ID: master
workflow graph module-4.cwl

https://github.com/andurill/ACCESS-Pipeline.git

Path: workflows/module-4.cwl

Branch/Commit ID: master