Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph fastq2fasta-create-bwaindex.cwl

https://github.com/hpobio-lab/viral-analysis.git

Path: cwl/fastq2fasta/fastq2fasta-create-bwaindex.cwl

Branch/Commit ID: master
workflow graph oxog_sub_wf.cwl

This is a subworkflow of the main oxog_varbam_annotat_wf workflow - this is not meant to be run as a stand-alone workflow!

https://github.com/svonworl/OxoG-Dockstore-Tools.git

Path: oxog_sub_wf.cwl

Branch/Commit ID: develop
workflow graph gk-run-qeheat-snapshot.cwl

https://github.com/vdikan/cwl-gk-thermal.git

Path: cwl/gk-run-qeheat-snapshot.cwl

Branch/Commit ID: master
workflow graph Alignment without BQSR

https://github.com/apaul7/cancer-genomics-workflow.git

Path: definitions/subworkflows/sequence_to_bqsr_nonhuman.cwl

Branch/Commit ID: low-vaf
workflow graph Functional analyis of sequences that match the 16S SSU

https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git

Path: workflows/16S_taxonomic_analysis.cwl

Branch/Commit ID: 5833078
workflow graph module-4.cwl

https://github.com/mskcc/access-pipeline.git

Path: workflows/module-4.cwl

Branch/Commit ID: master
workflow graph EMG QC workflow, (paired end version). Benchmarking with MG-RAST expt.

https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git

Path: workflows/emg-qc-paired.cwl

Branch/Commit ID: 5833078
workflow graph steplevel-resreq.cwl

https://github.com/common-workflow-language/cwl-v1.2.git

Path: tests/steplevel-resreq.cwl

Branch/Commit ID: main
workflow graph 04-quantification-se-revstranded.cwl

RNA-seq 04 quantification

 https://github.com/Duke-GCB/GGR-cwl.git

Path: v1.0/RNA-seq_pipeline/04-quantification-se-revstranded.cwl

Branch/Commit ID: master
workflow graph fp_filter workflow

https://github.com/genome/cancer-genomics-workflow.git

Path: fp_filter/workflow.cwl

Branch/Commit ID: toil_compatibility