Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	wgs alignment with qc	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/alignment_wgs.cwl Branch/Commit ID: b9e7392e72506cadd898a6ac4db330baf6535ab6
	bacterial_kmer	https://github.com/ncbi/pgap.git Path: bacterial_kmer/wf_bacterial_kmer.cwl Branch/Commit ID: 55b6ee46b0c9fb1c9949cd0888b388c6f11b73b1
	running cellranger mkfastq and count	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/cellranger_mkfastq_and_count.cwl Branch/Commit ID: 5cb188131f786ed33156e2f0e3dd63ab9c04245d
	1st-workflow.cwl	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/1st-workflow.cwl Branch/Commit ID: 280a852e74aec08cf79687e8004e17b1ab464534
	ST520101.cwl	https://github.com/Marco-Salvi/cwl-test.git Path: wf5201/ST520101.cwl Branch/Commit ID: 0e6cfe0646173e228b2fce63e23ed8f9d78598b0
	Detect Variants workflow	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/detect_variants_nonhuman.cwl Branch/Commit ID: 25eab0390f6866ce491b44c89d9e0435d228ab6f
	qc-basic.workflow.cwl	https://github.com/MG-RAST/pipeline.git Path: CWL/Workflows/qc-basic.workflow.cwl Branch/Commit ID: 49e29dfc5b1f7a7630831a1052f9136caa29dbf7
	abundance abundace profiles from annotated files, for protein and/or rna	https://github.com/MG-RAST/pipeline.git Path: CWL/Workflows/abundance-clca.workflow.cwl Branch/Commit ID: 49e29dfc5b1f7a7630831a1052f9136caa29dbf7
	protein annotation Proteins - predict, filter, cluster, identify, annotate	https://github.com/MG-RAST/pipeline.git Path: CWL/Workflows/protein-filter-annotation.workflow.cwl Branch/Commit ID: 49e29dfc5b1f7a7630831a1052f9136caa29dbf7
	index sim seq create sorted / filtered similarity file with feature sequences, and index by md5	https://github.com/MG-RAST/pipeline.git Path: CWL/Workflows/index_sim_seq.workflow.cwl Branch/Commit ID: 49e29dfc5b1f7a7630831a1052f9136caa29dbf7