Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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three_step_color.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/three_step_color.cwl Branch/Commit ID: 2f12f598b258fea93c8ef0db6e829a87bc3e341d |
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SoupX (workflow) - an R package for the estimation and removal of cell free mRNA contamination
Wrapped in a workflow SoupX tool for easy access to Cell Ranger pipeline compressed outputs. |
https://github.com/Barski-lab/workflows.git
Path: tools/soupx-subworkflow.cwl Branch/Commit ID: 94f3486d3867b9ece47c07bc8fe47f57569786f4 |
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pack.cwl
create textures and pack them to be a stellaris mod |
https://github.com/undu/stellaris-emblem-lab.git
Path: pack/pack.cwl Branch/Commit ID: master |
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scRNA-seq pipeline using Salmon and Alevin
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https://github.com/hubmapconsortium/salmon-rnaseq.git
Path: pipeline.cwl Branch/Commit ID: release |
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workflow.cwl
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https://github.com/uniqueg/rd_pipeline.git
Path: workflow.cwl Branch/Commit ID: master |
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count-lines11-wf.cwl
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https://github.com/common-workflow-language/cwl-v1.1.git
Path: tests/count-lines11-wf.cwl Branch/Commit ID: main |
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qiime2 identify differentially abundant features
Differential abundance testing with ANCOM from https://docs.qiime2.org/2018.4/tutorials/moving-pictures/ |
https://github.com/Duke-GCB/bespin-cwl.git
Path: packed/qiime2-step2-deblur.cwl Branch/Commit ID: qiime2-workflow Packed ID: qiime2-09-ancom.cwl |
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Chunked version of phmmer-v3.2.cwl
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https://github.com/mscheremetjew/workflow-is-cwl.git
Path: workflows/phmmer-v3.2-chunked-wf.cwl Branch/Commit ID: assembly |
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per_cluster_workflow.cwl
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https://github.com/FarahZKhan/scalability-reproducibility-chapter.git
Path: CWL/per_cluster_workflow.cwl Branch/Commit ID: master |
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03-map-pe.cwl
STARR-seq 03 mapping - reads: PE |
https://github.com/Duke-GCB/GGR-cwl.git
Path: v1.0/STARR-seq_pipeline/03-map-pe.cwl Branch/Commit ID: master |
