Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph manyjobs.cwl

https://github.com/fhembroff/wes-testing.git

Path: manyjobs/manyjobs.cwl

Branch/Commit ID: main
workflow graph cram_to_bam workflow

https://github.com/genome/cancer-genomics-workflow.git

Path: cram_to_bam/workflow.cwl

Branch/Commit ID: toil_compatibility
workflow graph wf.cwl#VDJ_Preprocess_Reads.cwl

https://github.com/aheinzel/tmp_rhapsody_for_cwl_vis.git

Path: wf.cwl

Branch/Commit ID: main

Packed ID: VDJ_Preprocess_Reads.cwl
workflow graph wf_contam_detect.cwl

https://github.com/ncbi/pipelines.git

Path: contam_filter/wf_contam_detect.cwl

Branch/Commit ID: master
workflow graph RNASelector as a CWL workflow

https://doi.org/10.1007/s12275-011-1213-z

 https://github.com/proteinswebteam/ebi-metagenomics-cwl.git

Path: workflows/rna-selector.cwl

Branch/Commit ID: master
workflow graph chksum_seqval_wf_interleaved_fq.cwl

https://github.com/cancerit/workflow-seq-import.git

Path: cwls/chksum_seqval_wf_interleaved_fq.cwl

Branch/Commit ID: 0.5.0
workflow graph htseq_count_workflow.cwl

https://github.com/NCI-GDC/htseq-cwl.git

Path: workflows/htseq_count_workflow.cwl

Branch/Commit ID: master
workflow graph blast2tree_v2.cwl

blastp, awk, blastdbcmd, clustalo, and fasttreeの5つのステップを実行

 https://github.com/yonesora56/togotv_cwl_for_remote_container.git

Path: zatsu_cwl_bioinformatics/blast2tree_v2.cwl

Branch/Commit ID: master
workflow graph iwdr_with_nested_dirs.cwl

https://github.com/common-workflow-language/cwl-v1.2.git

Path: tests/iwdr_with_nested_dirs.cwl

Branch/Commit ID: main
workflow graph Prepare user input

Prepare user input for NCBI-PGAP pipeline

 https://github.com/ncbi/pgap.git

Path: prepare_user_input2.cwl

Branch/Commit ID: test