Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
|---|---|---|---|
|
|
hello_world.cwl
|
https://github.com/Richard-Hansen/hello_world.git
Path: hello_world.cwl Branch/Commit ID: v1.0.0 |
|
|
|
zip_and_index_vcf.cwl
This is a very simple workflow of two steps. It will zip an input VCF file and then index it. The zipped file and the index file will be in the workflow output. |
https://github.com/svonworl/OxoG-Dockstore-Tools.git
Path: zip_and_index_vcf.cwl Branch/Commit ID: master |
|
|
|
qa_check_subwf.cwl
This subworkflow will perform a QA check on the OxoG outputs. It will perform the QA check on a single tumour and it associated VCFs |
https://github.com/svonworl/OxoG-Dockstore-Tools.git
Path: qa_check_subwf.cwl Branch/Commit ID: master |
|
|
|
EMG pipeline v3.0 (paired end version)
|
https://github.com/proteinswebteam/ebi-metagenomics-cwl.git
Path: workflows/emg-pipeline-v3-paired.cwl Branch/Commit ID: caea457 |
|
|
|
picard_markduplicates
Mark duplicates |
https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git
Path: structuralvariants/cwl/subworkflows/picard_markduplicates.cwl Branch/Commit ID: 1.1.3 |
|
|
|
bams2gvcf.woBQSR_female_chrX_wXTR.multisapmles.cwl
|
https://github.com/ddbj/human-reseq.git
Path: Workflows/bams2gvcf.woBQSR_female_chrX_wXTR.multisapmles.cwl Branch/Commit ID: master |
|
|
|
m2a_without_transfer_learning.cwl
|
https://github.com/chenlab-sj/M2A.git
Path: cwl/m2a_without_transfer_learning.cwl Branch/Commit ID: master |
|
|
|
Chunked version of phmmer-v3.2.cwl
|
https://github.com/mscheremetjew/workflow-is-cwl.git
Path: workflows/phmmer-v3.2-chunked-wf.cwl Branch/Commit ID: master |
|
|
|
CODEX analysis pipeline using Cytokit
|
https://github.com/hubmapconsortium/codex-pipeline.git
Path: pipeline.cwl Branch/Commit ID: 2d9ddc6 |
|
|
|
workflow_simple.cwl
|
https://github.com/mr-c/scalability-reproducibility-chapter.git
Path: CWL/workflow_simple.cwl Branch/Commit ID: CWL |
