Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph EMG pipeline v3.0 (draft CWL version)

https://github.com/proteinswebteam/ebi-metagenomics-cwl.git

Path: workflows/emg-pipeline-v3.cwl

Branch/Commit ID: 3168316
workflow graph cmsearch-multimodel.cwl

https://github.com/proteinswebteam/ebi-metagenomics-cwl.git

Path: workflows/cmsearch-multimodel.cwl

Branch/Commit ID: 0cf06f1
workflow graph linc_target.cwl

https://git.astron.nl/RD/LINC.git

Path: workflows/linc_target.cwl

Branch/Commit ID: cc03d87fe6d51216a74f38c6ba0b9dffb8e6ee81
workflow graph pipeline-fastq2vcf-parallel-bwa.cwl

DNAseq pipeline from fastq to vcf

 https://github.com/Sentieon/Sentieon-cwl.git

Path: pipeline/pipeline-fastq2vcf-parallel-bwa.cwl

Branch/Commit ID: master
workflow graph 05-quantification.cwl

ChIP-seq - Quantification - samples: treatment

 https://github.com/Duke-GCB/GGR-cwl.git

Path: v1.0/ChIP-seq_pipeline/05-quantification.cwl

Branch/Commit ID: master
workflow graph bqsr-flow.cwl

Run BQSR pre+post+plot flow

 https://github.com/Sentieon/Sentieon-cwl.git

Path: stage/bqsr-flow.cwl

Branch/Commit ID: master
workflow graph wf_main.cwl

https://github.com/idaks/cwl_modeling.git

Path: yw_cwl_modeling/yw2cwl_parser/example_sql/main/wf_main.cwl

Branch/Commit ID: master
workflow graph gatk-best-practice-generic-germline-short-variant-per-sample-cal_decomposed.cwl

https://github.com/sevenbridges-openworkflows/Broad-Best-Practice-Germline-snps-and-indels-variant-calling-CWL1.0-workflow-GATK-4.1.0.0.git

Path: gatk-best-practice-generic-germline-short-variant-per-sample-cal_decomposed.cwl

Branch/Commit ID: master
workflow graph count-lines9-wf.cwl

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/count-lines9-wf.cwl

Branch/Commit ID: master
workflow graph VIRTUS.PE.cwl

https://github.com/yyoshiaki/VIRTUS2.git

Path: workflow/VIRTUS.PE.cwl

Branch/Commit ID: master