Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph validate_interleaved_fq.cwl

https://github.com/cancerit/workflow-seq-import.git

Path: cwls/validate_interleaved_fq.cwl

Branch/Commit ID: 0.4.1
workflow graph qa_check_subwf.cwl

This subworkflow will perform a QA check on the OxoG outputs. It will perform the QA check on a single tumour and it associated VCFs

https://github.com/svonworl/OxoG-Dockstore-Tools.git

Path: qa_check_subwf.cwl

Branch/Commit ID: develop
workflow graph Exome QC workflow

https://github.com/tmooney/cancer-genomics-workflow.git

Path: definitions/subworkflows/qc_exome.cwl

Branch/Commit ID: downsample_and_recall
workflow graph Workflow to run pVACseq from detect_variants and rnaseq pipeline outputs

https://github.com/tmooney/cancer-genomics-workflow.git

Path: definitions/subworkflows/pvacseq.cwl

Branch/Commit ID: downsample_and_recall
workflow graph samtools_sort

https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git

Path: structuralvariants/cwl/subworkflows/samtools_sort.cwl

Branch/Commit ID: 1.1.3
workflow graph dna.cwl#main

https://github.com/common-workflow-library/legacy.git

Path: workflows/make-to-cwl/dna.cwl

Branch/Commit ID: master

Packed ID: main
workflow graph tRNA_selection.cwl

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: tools/tRNA_selection.cwl

Branch/Commit ID: 1b0851e
workflow graph htseq_count_workflow.cwl

https://github.com/nci-gdc/htseq-cwl.git

Path: workflows/htseq_count_workflow.cwl

Branch/Commit ID: master
workflow graph bwameth_trim_align_merge_sort_dedup.cwl

https://github.com/CompEpigen/PipelineOlympics.git

Path: CWL/workflows/bwameth/tools/bwameth_trim_align_merge_sort_dedup.cwl

Branch/Commit ID: main
workflow graph main-somatic.cwl

https://github.com/FarahZKhan/bcbio_test_cwl.git

Path: somatic/somatic-workflow/main-somatic.cwl

Branch/Commit ID: master