Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph indexing_bed

https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git

Path: structuralvariants/subworkflows/indexing_bed.cwl

Branch/Commit ID: 7fe278136146cbe6567816f1819f0725afeba021
workflow graph foldseek easy-search sub-workflow

retrieve sequence from blastdbcmd result makeblastdb: ../Tools/14_makeblastdb.cwl blastdbcmd: ../Tools/15_blastdbcmd.cwl seqretsplit: ../Tools/16_seqretsplit.cwl needle (Global alignment): ../Tools/17_needle.cwl water (Local alignment): ../Tools/17_water.cwl

https://github.com/yonesora56/plant2human.git

Path: Workflow/11_retrieve_sequence_wf.cwl

Branch/Commit ID: 9bd80581d7ced3ee307b020eb4b091e411c3cbfb
workflow graph phase VCF

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/phase_vcf.cwl

Branch/Commit ID: 258bd4353ad1ca7790b3ae626bf42ab8194e7561
workflow graph process VCF workflow

https://github.com/apaul7/cancer-genomics-workflow.git

Path: definitions/subworkflows/strelka_process_vcf.cwl

Branch/Commit ID: bfcb5ffbea3d00a38cc03595d41e53ea976d599d
workflow graph Apply filters to VCF file

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/filter_vcf.cwl

Branch/Commit ID: 3bebaf9b70331de9f4845e2223c55082f5a812fb
workflow graph record-output-wf_v1_2.cwl

https://github.com/common-workflow-language/cwl-utils.git

Path: testdata/record-output-wf_v1_2.cwl

Branch/Commit ID: 5837c20ede3340c0a5d2439a7d535d27f0b7cab3
workflow graph md_launch.cwl

https://github.com/douglowe/biobb_hpc_cwl_md_list.git

Path: md_launch.cwl

Branch/Commit ID: 8364406821867a716b9c877221d23ca6a6cc34be
workflow graph trim-rnaseq-se-dutp.cwl

Runs RNA-Seq dUTP BioWardrobe basic analysis with strand specific single-end data file.

https://github.com/Barski-lab/workflows.git

Path: workflows/trim-rnaseq-se-dutp.cwl

Branch/Commit ID: 568da91bb1c6182ba4f146e2a729cac1c3d8783c
workflow graph kmer_seq_entry_extract_wnode

https://github.com/ncbi/pgap.git

Path: task_types/tt_kmer_seq_entry_extract_wnode.cwl

Branch/Commit ID: d218e081d8f6a4fdab56a38ce0fc2fae6216cecc
workflow graph harmonization_novoalign_multi_readgroup.cwl

https://github.com/uc-cdis/genomel_pipelines.git

Path: genomel/cwl/workflows/harmonization/harmonization_novoalign_multi_readgroup.cwl

Branch/Commit ID: 3657003ce9fafd0e1916914ec5bf5fd3f28aedaf