Explore Workflows
View already parsed workflows here or click here to add your own
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hydromt-build-workflow.cwl#hydromt-workflow
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Path: example/hydromt/cwl/hydromt-build-workflow.cwl Branch/Commit ID: 122a19dcd8c8e78deade209377a11faf50e176f0 Packed ID: hydromt-workflow |
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Varscan Workflow
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Path: definitions/subworkflows/varscan_pre_and_post_processing.cwl Branch/Commit ID: bfcb5ffbea3d00a38cc03595d41e53ea976d599d |
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wf.cwl
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Path: cwl/multisource/wf.cwl Branch/Commit ID: 44c831fb97958470d88efc8ecf7ff09bfa2c4e1a |
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exome alignment and germline variant detection
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Path: definitions/subworkflows/germline_detect_variants.cwl Branch/Commit ID: 293dc7b83639d21a56efff2baf9dfe4e97b9b806 |
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sec-wf-out.cwl
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Path: tests/wf/sec-wf-out.cwl Branch/Commit ID: 6c86caa0571fd186d90a6600e0bb405596d4a5e0 |
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Alignment without BQSR
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Path: definitions/subworkflows/sequence_to_bqsr_nonhuman.cwl Branch/Commit ID: bfcb5ffbea3d00a38cc03595d41e53ea976d599d |
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umi per-lane alignment subworkflow
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Path: definitions/subworkflows/umi_alignment.cwl Branch/Commit ID: 93656ed6582073e434eab168c610625a835dce37 |
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WGS QC workflow nonhuman
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Path: definitions/subworkflows/qc_wgs_nonhuman.cwl Branch/Commit ID: bfcb5ffbea3d00a38cc03595d41e53ea976d599d |
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Detect Variants workflow
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Path: definitions/pipelines/detect_variants.cwl Branch/Commit ID: bfcb5ffbea3d00a38cc03595d41e53ea976d599d |
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Apply filters to VCF file
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Path: definitions/subworkflows/germline_filter_vcf.cwl Branch/Commit ID: 39ac49f5d080bbb6bfa97246f46a5b621254f622 |
