Explore Workflows

https://github.com/CERIT-SC/fireprot.git

Path: multimutants.cwl

Branch/Commit ID: master

https://github.com/apaul7/cancer-genomics-workflow.git

Path: definitions/subworkflows/vcf_readcount_annotator.cwl

Branch/Commit ID: low-vaf

https://github.com/common-workflow-library/legacy.git

Path: workflows/lobSTR/lobSTR-workflow.cwl

Branch/Commit ID: lobstr-v1

https://github.com/hubmapconsortium/sc-atac-seq-pipeline.git

Path: steps/sc_atac_seq_initial_analysis.cwl

Branch/Commit ID: develop

This workflow will run OxoG, variantbam, and annotate. Run this as `dockstore --script --debug workflow launch --descriptor cwl --local-entry --entry ./oxog_varbam_annotate_wf.cwl --json oxog_varbam_annotat_wf.input.json `

https://github.com/svonworl/OxoG-Dockstore-Tools.git

Path: oxog_varbam_annotate_wf.cwl

Branch/Commit ID: master

https://github.com/azzaea/cwl-scalability-vis.git

Path: host_process.cwl

Branch/Commit ID: main

Single-cell Reference Indices Builds a Cell Ranger and Cell Ranger ARC compatible reference folders from the custom genome FASTA and gene GTF annotation files

https://github.com/Barski-lab/sc-seq-analysis.git

Path: workflows/sc-ref-indices-wf.cwl

Branch/Commit ID: main

https://github.com/AlexanderSenf/orgaquant.git

Path: orgaquant_wf.cwl

Branch/Commit ID: 1.1

https://github.com/farahzkhan/ebi-metagenomics-cwl.git

Path: tools/collate_unique_SSU_headers.cwl

Branch/Commit ID: master

https://github.com/FarahZKhan/ebi-metagenomics-cwl.git

Path: tools/collate_unique_SSU_headers.cwl

Branch/Commit ID: master