Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	metabarcode (gene amplicon) analysis for fastq files protein - qc, preprocess, annotation, index, abundance	https://github.com/MG-RAST/pipeline.git Path: CWL/Workflows/metabarcode-fasta.workflow.cwl Branch/Commit ID: 2addcde0f4c1c8547f7f3906c2523cded23e9869
	indices-header.cwl	https://github.com/datirium/workflows.git Path: metadata/indices-header.cwl Branch/Commit ID: 9e3c3e65c19873cd1ed3cf7cc3b94ebc75ae0cc5
	Per-chromosome pindel	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/pindel_cat.cwl Branch/Commit ID: 86fbeb95ef85111f3b4c6bc2bba8f06cef64e157
	tt_hmmsearch_wnode.cwl	https://github.com/ncbi/pgap.git Path: task_types/tt_hmmsearch_wnode.cwl Branch/Commit ID: 251343ee5b7586ba2cf89458555f1da87a7558f2
	cond-wf-006.cwl	https://github.com/common-workflow-language/cwl-v1.2.git Path: tests/conditionals/cond-wf-006.cwl Branch/Commit ID: 31ec48a8d81ef7c1b2c5e9c0a19e7623efe4a1e2
	Subworkflow to allow calling cnvkit with cram instead of bam files	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/cram_to_cnvkit.cwl Branch/Commit ID: 25aa4788dd4efb1cc8ed6f609cb7803896e4d28d
	count-lines5-wf.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/count-lines5-wf.cwl Branch/Commit ID: cd779a90a4336563dcf13795111f502372c6af83
	count-lines9-wf.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/count-lines9-wf.cwl Branch/Commit ID: 62ae25772a8e98b6591554882daa3f3758079fca
	ani_top_n	https://github.com/ncbi/pgap.git Path: task_types/tt_ani_top_n.cwl Branch/Commit ID: af468ae34c82dc88399aeedfd8f12f1e87052367
	gathered exome alignment and somatic variant detection	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/somatic_exome_gathered.cwl Branch/Commit ID: 2decd55996b912feb48be5db1b052aa3274ee405