Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph exomeseq-gatk4-01-preprocessing.cwl

https://github.com/Duke-GCB/bespin-cwl.git

Path: subworkflows/exomeseq-gatk4-01-preprocessing.cwl

Branch/Commit ID: gatk4-fixes
workflow graph integrity.cwl

https://github.com/denis-yuen/gdc-dnaseq-cwl.git

Path: workflows/dnaseq/integrity.cwl

Branch/Commit ID: master
workflow graph LSU-from-tablehits.cwl

https://github.com/proteinswebteam/ebi-metagenomics-cwl.git

Path: tools/LSU-from-tablehits.cwl

Branch/Commit ID: master
workflow graph qc_workflow_wo_waltz.cwl

This workflow is intended to be used to test the QC module, without having to run the long waltz step

https://github.com/mskcc/Innovation-Pipeline.git

Path: workflows/QC/qc_workflow_wo_waltz.cwl

Branch/Commit ID: master
workflow graph transform.cwl

https://github.com/NCI-GDC/gdc-dnaseq-cwl.git

Path: workflows/dnaseq/transform.cwl

Branch/Commit ID: 1.1
workflow graph CRAM_md5sum.cwl

https://github.com/DataBiosphere/topmed-workflows.git

Path: CRAM-no-header-md5sum/md5sum/CRAM_md5sum.cwl

Branch/Commit ID: 1.23.0
workflow graph snapanalysis_setup_and_analyze.cwl

https://github.com/hubmapconsortium/sc-atac-seq-pipeline.git

Path: steps/snapanalysis_setup_and_analyze.cwl

Branch/Commit ID: 302f1f3
workflow graph star-stringtie_wf_pe.cwl

https://github.com/pitagora-network/pitagora-cwl.git

Path: workflows/star-stringtie/paired_end/star-stringtie_wf_pe.cwl

Branch/Commit ID: master
workflow graph 04-peakcall-se.cwl

ATAC-seq 04 quantification - SE

 https://github.com/Duke-GCB/GGR-cwl.git

Path: v1.0/ATAC-seq_pipeline/04-peakcall-se.cwl

Branch/Commit ID: v1.0.0
workflow graph CompPASS-Plus_workflow.cwl

https://github.com/adamscharlotte/CWL-workflow.git

Path: CompPASS-Plus_workflow.cwl

Branch/Commit ID: master