Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	etl.cwl	https://github.com/nci-gdc/gdc-dnaseq-cwl.git Path: workflows/fastq_readgroup_stats/etl.cwl Branch/Commit ID: b110a23e2efaaadfd4feca4f9e130946d1c5418d
	Replace legacy AML Trio Assay	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/aml_trio_cle.cwl Branch/Commit ID: adcae308fdccaa1190083616118dfadb4df65dca
	Tumor-Only Detect Variants workflow	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/tumor_only_detect_variants.cwl Branch/Commit ID: 480c438a6a7e78c624712aec01bc4214d2bc179c
	tt_univec_wnode.cwl	https://github.com/ncbi/pgap.git Path: task_types/tt_univec_wnode.cwl Branch/Commit ID: a2d6cd4c53bf3501f6bd79edebb7ca30bba8456f
	Chipseq alignment with qc and creating homer tag directory	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/chipseq.cwl Branch/Commit ID: cc3e7f1ccfdc7101c22bf88792608504eea7d53a
	tt_univec_wnode.cwl	https://github.com/ncbi/pgap.git Path: task_types/tt_univec_wnode.cwl Branch/Commit ID: 16e3915d2a357e2a861b30911c832e5ddc0c1784
	heatmap-prepare.cwl Workflow runs homer-make-tag-directory.cwl tool using scatter for the following inputs - bam_file - fragment_size - total_reads `dotproduct` is used as a `scatterMethod`, so one element will be taken from each array to construct each job: 1) bam_file[0] fragment_size[0] total_reads[0] 2) bam_file[1] fragment_size[1] total_reads[1] ... N) bam_file[N] fragment_size[N] total_reads[N] `bam_file`, `fragment_size` and `total_reads` arrays should have the identical order.	https://github.com/datirium/workflows.git Path: subworkflows/heatmap-prepare.cwl Branch/Commit ID: c602e3cdd72ff904dd54d46ba2b5146eb1c57022
	Subworkflow to allow calling different SV callers which require bam files as inputs	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/single_sample_sv_callers.cwl Branch/Commit ID: 44ada20f3eeb59005d5bd999d2435102e9bae991
	wgs alignment with qc	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/alignment_wgs.cwl Branch/Commit ID: 480c438a6a7e78c624712aec01bc4214d2bc179c
	wgs alignment with qc	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/wgs_alignment.cwl Branch/Commit ID: 44ada20f3eeb59005d5bd999d2435102e9bae991