Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph exome alignment and germline variant detection, with optitype for HLA typing

https://github.com/tmooney/cancer-genomics-workflow.git

Path: definitions/pipelines/germline_exome_hla_typing.cwl

Branch/Commit ID: downsample_and_recall
workflow graph EMG QC workflow, (paired end version). Benchmarking with MG-RAST expt.

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/emg-qc-paired.cwl

Branch/Commit ID: a8abd0e
workflow graph bed_to_coverage_track.cwl

https://github.com/CompEpigen/ATACseq_workflows.git

Path: CWL/workflow_modules/bed_to_coverage_track.cwl

Branch/Commit ID: master
workflow graph scatter GATK HaplotypeCaller over intervals

https://github.com/apaul7/cancer-genomics-workflow.git

Path: definitions/subworkflows/gatk_haplotypecaller_iterator.cwl

Branch/Commit ID: low-vaf
workflow graph count-lines14-wf.cwl

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/count-lines14-wf.cwl

Branch/Commit ID: master
workflow graph assembly-2.cwl

https://github.com/EBI-Metagenomics/pipeline-v5.git

Path: workflows/conditionals/assembly/assembly-2.cwl

Branch/Commit ID: master
workflow graph manyjobs.cwl

https://github.com/fhembroff/wes-testing.git

Path: manyjobs/manyjobs.cwl

Branch/Commit ID: main
workflow graph hello_world.cwl

https://github.com/Richard-Hansen/hello_world.git

Path: hello_world.cwl

Branch/Commit ID: v1.0.0
workflow graph lobSTR-workflow.cwl

https://github.com/common-workflow-language/workflows.git

Path: workflows/lobSTR/lobSTR-workflow.cwl

Branch/Commit ID: 17b65ea19d81527090fded62ffa0e
workflow graph l1a_workflow.cwl

https://github.com/unity-sds/sounder-sips-application.git

Path: cwl/l1a_workflow.cwl

Branch/Commit ID: main