Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph cluster_blastp_wnode and gpx_qdump combined

https://github.com/ncbi/pgap.git

Path: task_types/tt_cluster_and_qdump.cwl

Branch/Commit ID: test
workflow graph example.cwl

Example CWL workflow that uses some advanced features

https://github.com/mskcc/pluto-cwl.git

Path: cwl/example.cwl

Branch/Commit ID: ab0192b19d01046d5db2fc5233678a97b47210e6
workflow graph gatk4_cohort_genotyping.cwl

https://github.com/uc-cdis/genomel_pipelines.git

Path: genomel/cwl/workflows/variant_calling/gatk4_cohort_genotyping.cwl

Branch/Commit ID: master
workflow graph bulk_process.cwl

https://github.com/hubmapconsortium/multiome-rna-atac-pipeline.git

Path: sc-atac-seq-pipeline/steps/bulk_process.cwl

Branch/Commit ID: 68e0cc1
workflow graph count-lines10-wf.cwl

https://github.com/common-workflow-language/common-workflow-language.git

Path: v1.0/v1.0/count-lines10-wf.cwl

Branch/Commit ID: master
workflow graph Salmon quantification, FASTQ -> H5AD count matrix

https://github.com/hubmapconsortium/salmon-rnaseq.git

Path: steps/salmon-quantification.cwl

Branch/Commit ID: 8c435d7
workflow graph bulk-atac-seq-pipeline.cwl

https://github.com/hubmapconsortium/sc-atac-seq-pipeline.git

Path: bulk-atac-seq-pipeline.cwl

Branch/Commit ID: 302f1f3
workflow graph wf-alignment.cwl

https://github.com/bcbio/bcbio_validation_workflows.git

Path: SGDP-recall-CGC/SGDP-recall-cgc/wf-alignment.cwl

Branch/Commit ID: master
workflow graph format-maf

https://github.com/mskcc/roslin-variant.git

Path: setup/cwl/portal-formatting.cli/1.0.0/format-maf.cwl

Branch/Commit ID: dev
workflow graph gaps_or_not.cwl

https://github.com/nal-i5k/organism_onboarding.git

Path: gaps_or_not.cwl

Branch/Commit ID: master