Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	umi molecular alignment workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/molecular_alignment.cwl Branch/Commit ID: 18600518ce6539a2e29c1707392a4c5da5687fa3
	protein annotation Proteins - predict, cluster, identify, annotate	https://github.com/MG-RAST/pipeline.git Path: CWL/Workflows/protein-annotation.workflow.cwl Branch/Commit ID: 721aaf285e1848c3c52da38a1fed95192aeff8f4
	exome alignment and somatic variant detection	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/somatic_exome.cwl Branch/Commit ID: e2a34d2b8c406db9aed8e49e8bdcf36f51444379
	running cellranger mkfastq and count	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/cellranger_mkfastq_and_count.cwl Branch/Commit ID: a93be3183c2218ee50f13ae2675dd1cde563fdbc
	DeriveArrayElementCoordinates Derive array element coordinates and archive data generated in derivation process.	https://github.com/gammasim/workflows.git Path: workflows/DeriveArrayElementCoordinates.cwl Branch/Commit ID: 13a1a949db93afa18ffe8180ff9549e395184e4b
	rnaseq-pe-dutp.cwl Runs RNA-Seq BioWardrobe basic analysis with strand specific pair-end data file.	https://github.com/Barski-lab/workflows.git Path: workflows/rnaseq-pe-dutp.cwl Branch/Commit ID: e706ffe742cfdf713c4315ab2fb56d07f7e688cb
	count-lines4-wf.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/count-lines4-wf.cwl Branch/Commit ID: e8b3565a008d95859fc44227987a54e6a53a8c29
	mutect2_calling.cwl GATK4.1.2 Mutect2 workflow	https://github.com/NCI-GDC/gatk4_mutect2_cwl.git Path: subworkflows/mutect2_calling.cwl Branch/Commit ID: 0debfe681fc16cfee943d799dcebc7fe4bb82495
	Detect Variants workflow	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/detect_variants.cwl Branch/Commit ID: a59a803e1809a8fbfabca6b8962a8ad66dd01f1d
	directory.cwl Inspect provided directory and return filenames. Generate a new directory and return it (including content).	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/directory.cwl Branch/Commit ID: 819c81af5449ec912bbbbead042ad66b8d3fd8d4