Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph cram_to_bam workflow

https://github.com/fgomez02/analysis-workflows.git

Path: definitions/subworkflows/cram_to_bam_and_index.cwl

Branch/Commit ID: No_filters_detect_variants
workflow graph gk--store-xvs-row.cwl

https://github.com/vdikan/cwl-gk-thermal.git

Path: cwl/gk--store-xvs-row.cwl

Branch/Commit ID: master
workflow graph mutect parallel workflow

https://github.com/litd/analysis-workflows.git

Path: definitions/subworkflows/mutect.cwl

Branch/Commit ID: master
workflow graph foldseek easy-search workflow

\"foldseek easy-search sub-workflow for plant2human workflow Step 1: listing files Step 2: foldseek easy-search process\"

https://github.com/yonesora56/plant2human.git

Path: Workflow/10_foldseek_easy_search_swf_permissive.cwl

Branch/Commit ID: main
workflow graph FASTQ Vector Removal

This workflow clean up vectros from fastq files

 https://github.com/ncbi/cwl-ngs-workflows-cbb.git

Path: workflows/File-formats/remove-fastq-reads-from-blast.cwl

Branch/Commit ID: master
workflow graph align_sort_sa

https://github.com/ncbi/pgap.git

Path: task_types/tt_align_sort_sa.cwl

Branch/Commit ID: f403d9e26d60d3e3591a03077bc9dfa188b1c2bb
workflow graph hi-c-processing-parta-juicer.cwl

https://github.com/4dn-dcic/pipelines-cwl.git

Path: cwl_awsem_v1/hi-c-processing-parta-juicer.cwl

Branch/Commit ID: dev2
workflow graph scRNA-seq pipeline using Salmon and Alevin

https://github.com/hubmapconsortium/salmon-rnaseq.git

Path: pipeline.cwl

Branch/Commit ID: ada7831
workflow graph wffail.cwl

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/wffail.cwl

Branch/Commit ID: aaaece1c097c3f06afa21f7ecddcc85519e2bb2b
workflow graph foldseek easy-search workflow (Stringent Mode)

\"foldseek easy-search sub-workflow for plant2human workflow (Stringent Mode) Uses self-built Foldseek index (e.g., Human Proteome v6) without taxonomy filtering. Step 1: listing protein structure files (mmCIF format) Step 2: foldseek easy-search process\"

https://github.com/yonesora56/plant2human.git

Path: Workflow/10_foldseek_easy_search_swf_stringent.cwl

Branch/Commit ID: main