Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph 02-trim-pe.cwl

ATAC-seq 02 trimming - reads: PE

 https://github.com/alexbarrera/GGR-cwl.git

Path: v1.0/ATAC-seq_pipeline/02-trim-pe.cwl

Branch/Commit ID: v1.0
workflow graph workflow1.cwl

https://github.com/petehague/stoa.git

Path: actions/workflow1.cwl

Branch/Commit ID: master
workflow graph io-int-wf.cwl

https://github.com/common-workflow-language/cwl-v1.2.git

Path: tests/io-int-wf.cwl

Branch/Commit ID: main
workflow graph SSU-from-tablehits.cwl

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: tools/SSU-from-tablehits.cwl

Branch/Commit ID: 8515542
workflow graph Filter single sample sv vcf from depth callers(cnvkit/cnvnator)

https://github.com/tmooney/cancer-genomics-workflow.git

Path: definitions/subworkflows/sv_depth_caller_filter.cwl

Branch/Commit ID: downsample_and_recall
workflow graph bulk_process.cwl

https://github.com/hubmapconsortium/sc-atac-seq-pipeline.git

Path: steps/bulk_process.cwl

Branch/Commit ID: 5465f66
workflow graph adapter for sequence_align_and_tag

Some workflow engines won't stage files in our nested structure, so parse it out here

 https://github.com/litd/analysis-workflows.git

Path: definitions/subworkflows/sequence_align_and_tag_adapter.cwl

Branch/Commit ID: master
workflow graph ValidateOpticalPSF

Validate telescope (whole dish) optical point-spread function

 https://github.com/gammasim/workflows.git

Path: workflows/ValidateOpticalPSF.cwl

Branch/Commit ID: main
workflow graph count-lines17-wf.cwl

https://github.com/common-workflow-language/common-workflow-language.git

Path: v1.0/v1.0/count-lines17-wf.cwl

Branch/Commit ID: master
workflow graph sorter.cwl

https://github.com/hubmapconsortium/spatial-transcriptomics-pipeline.git

Path: steps/sorter.cwl

Branch/Commit ID: master