Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	kmer_cache_store	https://github.com/ncbi/pgap.git Path: task_types/tt_kmer_cache_store.cwl Branch/Commit ID: f10de890d1d2271299931349fa8aea660acef4ee
	Hello World Outputs a message using echo	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/hello-workflow.cwl Branch/Commit ID: 55ccde7c2fe3e7899136ce8606a341e292d7050a
	kmer_seq_entry_extract_wnode	https://github.com/ncbi/pgap.git Path: task_types/tt_kmer_seq_entry_extract_wnode.cwl Branch/Commit ID: c28cfb9882dedd3c522160f933cff1050ae24100
	Varscan Workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/varscan_germline.cwl Branch/Commit ID: da335d9963418f7bedd84cb2791a0df1b3165ffe
	exome alignment with qc	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/exome_alignment.cwl Branch/Commit ID: 051074fce4afd9732ef34db9dd43d3a1d8e979d6
	Subworkflow that runs cnvkit in single sample mode and returns a vcf file	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/cnvkit_single_sample.cwl Branch/Commit ID: b7d9ace34664d3cedb16f2512c8a6dc6debfc8ca
	tt_fscr_calls_pass1	https://github.com/ncbi/pgap.git Path: task_types/tt_fscr_calls_pass1.cwl Branch/Commit ID: 953d7866bc70e14c02a6bb8c5a72305caa823bfc
	conflict.cwl#main	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/conflict.cwl Branch/Commit ID: efb40a812cdba2df6699f130ee5aeea9b63045cd Packed ID: main
	Feature expression merge - combines feature expression from several experiments Feature expression merge - combines feature expression from several experiments ========================================================================= Workflows merges RPKM (by default) gene expression from several experiments based on the values from GeneId, Chrom, TxStart, TxEnd and Strand columns (by default). Reported unique columns are renamed based on the experiments names.	https://github.com/datirium/workflows.git Path: workflows/feature-merge.cwl Branch/Commit ID: bf80c9339d81a78aefb8de661bff998ed86e836e
	scatter-valuefrom-wf6.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/scatter-valuefrom-wf6.cwl Branch/Commit ID: 65aedc5e7e1f3ccace7f9022f8a54b3f0d5c9a8c