Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph presto.cwl

https://github.com/eosc-lofar/presto-cwl.git

Path: presto.cwl

Branch/Commit ID: visualise
workflow graph import_include_test.cwl

https://github.com/wshands/CWL1.2Test.git

Path: import_include_test.cwl

Branch/Commit ID: develop
workflow graph bgzip and index VCF

https://github.com/mnneveau/cancer-genomics-workflow.git

Path: varscan/bgzip_and_index.cwl

Branch/Commit ID: master
workflow graph preprocess.cwl

https://github.com/NCBI-Hackathons/Epigenomics_CWL.git

Path: cwl/tools/preprocess.cwl

Branch/Commit ID: master
workflow graph taxcheck.cwl

Perform taxonomic identification tasks on an input genome

https://github.com/ncbi/pgap.git

Path: taxcheck.cwl

Branch/Commit ID: dev
workflow graph main.cwl

https://github.com/CLAIRE-COVID/AI-Covid19-pipelines.git

Path: online/streamflow/cwl/main.cwl

Branch/Commit ID: master
workflow graph CRAM_md5sum_checker_wrapper.cwl

This wraps the md5sum tool with a checker workflow that runs both the tool and a tool that performs verification of results

https://github.com/DataBiosphere/toolbox.git

Path: CRAM-no-header-md5sum/CRAM_md5sum_checker_wrapper.cwl

Branch/Commit ID: 1.30.0
workflow graph Unaligned to aligned BAM

https://github.com/MarkRobbo/workflows.git

Path: workflows/hello/exome_alignment_packed.cwl

Branch/Commit ID: master

Packed ID: align.cwl
workflow graph Apply filters to VCF file

https://github.com/apaul7/cancer-genomics-workflow.git

Path: definitions/subworkflows/filter_vcf_nonhuman.cwl

Branch/Commit ID: low-vaf
workflow graph ST610106.cwl

https://github.com/Marco-Salvi/dtc61.git

Path: ST610106.cwl

Branch/Commit ID: main