Explore Workflows

QIIME2 Alpha/beta diversity analysis and Alpha rarefaction plotting

https://github.com/Duke-GCB/bespin-cwl.git

Path: packed/qiime2-step3-alpha-analysis.cwl

Branch/Commit ID: qiime2-workflow-paired

Packed ID: main

https://github.com/andurill/ACCESS-Pipeline.git

Path: workflows/QC/qc_workflow.cwl

Branch/Commit ID: 0.0.33_dmp

https://github.com/NCGM-genome/WGSpipeline.git

Path: Workflows/germline-gpu-v4.0.1.cwl

Branch/Commit ID: main

Receive parameter update (e.g., by querying an external source like a configuration or calibration database) or by expert input (e.g., by a member of a telescope team or a simulation pipeline expert).

https://github.com/gammasim/workflows.git

Path: workflows/SetParameterFromExternal.cwl

Branch/Commit ID: main

https://github.com/mskcc/roslin-variant.git

Path: setup/cwl/module-1.scatter.chunk.cwl

Branch/Commit ID: 2.4.x

https://github.com/mskcc/roslin-variant.git

Path: setup/cwl/module-6.cwl

Branch/Commit ID: dev

Alpha rarefaction plotting from https://docs.qiime2.org/2018.4/tutorials/moving-pictures/

https://github.com/bespin-workflows/16s-qiime2.git

Path: subworkflows/qiime2-07-alpha-rarefaction.cwl

Branch/Commit ID: develop

Calculate effective focal length for the given telescope optics.

https://github.com/gammasim/workflows.git

Path: workflows/SetEffectiveFocalLength.cwl

Branch/Commit ID: main

Transform array element coordinates into the coordinate system required by the simulation pipeline (i.e., CORSIKA system).

https://github.com/gammasim/workflows.git

Path: workflows/SetArrayElementCoordinates.cwl

Branch/Commit ID: main

https://github.com/aheinzel/tmp_rhapsody_for_cwl_vis.git

Path: wf.cwl

Branch/Commit ID: main

Packed ID: VDJ_Analyze_Reads_TCR.cwl