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Path: pipeline.cwl
Branch/Commit ID: 94520dc
Path: tests/cwl/cwl-v1.2/cond-wf-001.cwl
Branch/Commit ID: master
Path: varscan/varscan.cwl
Path: subworkflows/exomeseq-01-preprocessing.cwl
Path: wes_alignment.cwl
Branch/Commit ID: main
Path: revcomp/revcomp.cwl
Path: workflows/subworkflows/snps_and_indels.cwl
multiple mzml files, all with the same condition
Path: cwl/maw.cwl
Path: tools/tRNA_selection.cwl
Branch/Commit ID: 5e82174
run 3-pass dedup: algo LocusCollector + algo Dedup output_dup_read_name + algo Dedup dedup_by_read_name sequentially
Path: stage/dedup-3-pass.cwl