Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph wf-alignment.cwl

https://github.com/bcbio/bcbio_validation_workflows.git

Path: NA12878-chr20/NA12878-platinum-chr20-workflow/wf-alignment.cwl

Branch/Commit ID: master
workflow graph Process cnvkit outputs

https://github.com/ChrisMaherLab/PACT.git

Path: subworkflows/process_cnvkit_results.cwl

Branch/Commit ID: master
workflow graph Per-region pindel

https://github.com/tmooney/cancer-genomics-workflow.git

Path: definitions/subworkflows/pindel_cat.cwl

Branch/Commit ID: downsample_and_recall
workflow graph scRNA-seq pipeline using Salmon and Alevin

https://github.com/hubmapconsortium/salmon-rnaseq.git

Path: pipeline.cwl

Branch/Commit ID: 123d1bd
workflow graph cnv_gridss

CNV GRIDSS calling

https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git

Path: structuralvariants/subworkflows/cnv_gridss.cwl

Branch/Commit ID: 3bb03c9b
workflow graph Hello World

Outputs a message using echo

 https://github.com/common-workflow-language/workflows.git

Path: workflows/hello/hello.cwl

Branch/Commit ID: master
workflow graph Alignment without BQSR

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/sequence_to_bqsr_nonhuman.cwl

Branch/Commit ID: master
workflow graph snpeff_all.cwl

https://github.com/nigyta/rice_reseq.git

Path: workflows/snpeff_all.cwl

Branch/Commit ID: master
workflow graph wf-loadContents2.cwl

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/wf-loadContents2.cwl

Branch/Commit ID: master
workflow graph module-1-2-chunk

https://github.com/mskcc/roslin-variant.git

Path: setup/cwl/module-1-2.chunk.cwl

Branch/Commit ID: 2.4.x