Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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animal-genome-assembly.packed.cwl#hybrid_error_correction.cwl
Sub workflow used in the Animal Genome Assembly pipeline by Kazuharu Arakawa (@gaou_ak), CWLized by Tazro Ohta (@inutano) |
https://github.com/pitagora-network/DAT2-cwl.git
Path: workflow/animal-genome-assembly/animal-genome-assembly.packed.cwl Branch/Commit ID: main Packed ID: hybrid_error_correction.cwl |
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EMG assembly for paired end Illumina
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: workflows/emg-assembly.cwl Branch/Commit ID: 0746e12 |
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exomeseq-gatk4-00-prepare-reference-data.cwl
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https://github.com/bespin-workflows/exomeseq-gatk4.git
Path: subworkflows/exomeseq-gatk4-00-prepare-reference-data.cwl Branch/Commit ID: develop |
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workflow.cwl
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https://github.com/Sage-Bionetworks-Challenges/Anti-PD1-DREAM-Infrastructure.git
Path: workflow.cwl Branch/Commit ID: master |
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Genome conversion and annotation
Workflow for genome annotation from EMBL format |
https://git.wageningenur.nl/unlock/cwl.git
Path: cwl/workflows/workflow_sapp_microbes.cwl Branch/Commit ID: master |
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bgzip and index VCF
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https://github.com/apaul7/cancer-genomics-workflow.git
Path: definitions/subworkflows/bgzip_and_index.cwl Branch/Commit ID: low-vaf |
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conflict-wf.cwl#collision
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https://github.com/common-workflow-language/cwl-v1.1.git
Path: tests/conflict-wf.cwl Branch/Commit ID: main Packed ID: collision |
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count-lines13-wf.cwl
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https://github.com/common-workflow-language/cwl-v1.1.git
Path: tests/count-lines13-wf.cwl Branch/Commit ID: master |
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Salmon quantification, FASTQ -> H5AD count matrix
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https://github.com/hubmapconsortium/salmon-rnaseq.git
Path: steps/salmon-quantification.cwl Branch/Commit ID: 69da10a |
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Run genomic CMsearch
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https://github.com/ncbi/pgap.git
Path: bacterial_noncoding/wf_gcmsearch.cwl Branch/Commit ID: dev |
