Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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output-arrays-file-wf.cwl
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https://github.com/common-workflow-language/common-workflow-language.git
Path: v1.0/v1.0/output-arrays-file-wf.cwl Branch/Commit ID: master |
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Low vaf Detect Variants workflow for Megan Cooper
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https://github.com/apaul7/cancer-genomics-workflow.git
Path: definitions/pipelines/low_vaf_detect_variants.cwl Branch/Commit ID: low-vaf |
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prep.cwl
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https://git.astron.nl/RD/LINC.git
Path: workflows/linc_target/prep.cwl Branch/Commit ID: master |
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exomeseq-gatk4-02-variantdiscovery.cwl
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https://github.com/Duke-GCB/bespin-cwl.git
Path: subworkflows/exomeseq-gatk4-02-variantdiscovery.cwl Branch/Commit ID: gatk4-fixes |
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dynresreq-workflow-inputdefault.cwl
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https://github.com/common-workflow-language/cwl-v1.1.git
Path: tests/dynresreq-workflow-inputdefault.cwl Branch/Commit ID: master |
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bqsr-distr.cwl
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https://github.com/sentieon/sentieon-cwl.git
Path: stage/bqsr-distr.cwl Branch/Commit ID: master |
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Align reference proteins plane complete workflow, with miniprot
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https://github.com/ncbi/pgap.git
Path: protein_alignment/wf_protein_alignment_miniprot.cwl Branch/Commit ID: test |
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wf_get_peaks_scatter_se.cwl
The \"main\" workflow. Takes fastq files generated using the seCLIP protocol (https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5991800/) and outputs candidate RBP binding regions (peaks). runs: wf_get_peaks_se.cwl through scatter across multiple samples. |
https://github.com/yeolab/eclip.git
Path: cwl/wf_get_peaks_scatter_se.cwl Branch/Commit ID: master |
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bwa_index
Modified from https://github.com/kids-first/kf-somatic-workflow/blob/master/sub_workflows/prepare_reference.cwl |
https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git
Path: structuralvariants/cwl/subworkflows/bwa_index.cwl Branch/Commit ID: 1.0.7 |
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count-lines11-null-step-wf.cwl
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https://github.com/common-workflow-language/cwl-v1.1.git
Path: tests/count-lines11-null-step-wf.cwl Branch/Commit ID: master |
