Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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collate_unique_SSU_headers.cwl
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: tools/collate_unique_SSU_headers.cwl Branch/Commit ID: 3f85843 |
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PerformanceSummaryGenome_v0_1_0.cwl
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https://github.com/PMCC-BioinformaticsCore/janis-pipelines.git
Path: janis_pipelines/wgs_somatic/cwl/tools/PerformanceSummaryGenome_v0_1_0.cwl Branch/Commit ID: master |
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qiime2 create feature visual summaries
FeatureTable and FeatureData summaries from https://docs.qiime2.org/2018.4/tutorials/moving-pictures/ |
https://github.com/Duke-GCB/bespin-cwl.git
Path: packed/qiime2-step2-dada2.cwl Branch/Commit ID: qiime2-workflow-paired Packed ID: qiime2-04-features.cwl |
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align-test-files-pack.cwl#align-texts-wf.cwl
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https://github.com/KBNLresearch/ochre.git
Path: ochre/cwl/align-test-files-pack.cwl Branch/Commit ID: master Packed ID: align-texts-wf.cwl |
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sc_atac_seq_prep_process_init.cwl
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https://github.com/hubmapconsortium/multiome-rna-atac-pipeline.git
Path: sc-atac-seq-pipeline/steps/sc_atac_seq_prep_process_init.cwl Branch/Commit ID: 999afe5 |
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Bacterial Annotation, pass 2, blastp-based functional annotation (first pass)
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https://github.com/ncbi/pgap.git
Path: bacterial_annot/wf_bacterial_annot_pass2.cwl Branch/Commit ID: master |
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tnhc-distr.cwl
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https://github.com/Sentieon/Sentieon-cwl.git
Path: stage/tnhc-distr.cwl Branch/Commit ID: master |
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kallisto-demo.cwl
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https://github.com/alexbarrera/GGR-cwl.git
Path: workflows/workflows/kallisto-demo.cwl Branch/Commit ID: master |
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pindel parallel workflow
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https://github.com/apaul7/cancer-genomics-workflow.git
Path: definitions/subworkflows/pindel.cwl Branch/Commit ID: low-vaf |
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Subworkflow for Annotation
\"Subworkflow for Metagenome Annotation This subworkflow is for annotation of predicted protein coding sequences. \" |
https://github.com/RyoMameda/ComplexMicrobiome_GeneExpression_CWL.git
Path: Workflow/annotation_sw.cwl Branch/Commit ID: main |
