Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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stage.cwl
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Path: v102/workflows/subworkflows/stage.cwl Branch/Commit ID: master |
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Long-covid.cwl
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Path: Long-covid---ace80670-7a21-11ed-b9d2-e51f21933d80/Long-covid.cwl Branch/Commit ID: read-potential-cases-disc |
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umi duplex alignment workflow
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Path: definitions/subworkflows/duplex_alignment.cwl Branch/Commit ID: No_filters_detect_variants |
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main-giab-chm.cwl
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Path: giab-chm/giab-chm-workflow/main-giab-chm.cwl Branch/Commit ID: master |
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Salmon quantification, FASTQ -> H5AD count matrix
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Path: salmon-rnaseq/steps/salmon-quantification.cwl Branch/Commit ID: c338cd3 |
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05-quantification.cwl
ATAC-seq - Quantification |
Path: v1.0/ATAC-seq_pipeline/05-quantification.cwl Branch/Commit ID: master |
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cram_to_bam workflow
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Path: definitions/subworkflows/cram_to_bam_and_index.cwl Branch/Commit ID: downsample_and_recall |
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metabarcode (gene amplicon) analysis for fastq files
protein - qc, preprocess, annotation, index, abundance |
Path: CWL/Workflows/metabarcode-fastq.workflow.cwl Branch/Commit ID: master |
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count-lines6-wf.cwl
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Path: v1.0/v1.0/count-lines6-wf.cwl Branch/Commit ID: master |
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find_hotspots_in_normals.cwl
Workflow to find hotspot VAFs from duplex (for Tumor sample) and unfiltered (for Normal sample) pileups. These inputs are all required to be sorted in the same order: sample_ids patient_ids sample_classes unfiltered_pileups duplex_pileups |
Path: workflows/subworkflows/find_hotspots_in_normals.cwl Branch/Commit ID: master |
