Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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bgzip and index VCF
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https://github.com/acoffman/dockstore-test.git
Path: Dockstore.cwl Branch/Commit ID: master |
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pcr-bottleneck-coef.cwl
ChIP-seq - map - PCR Bottleneck Coefficients |
https://github.com/alexbarrera/GGR-cwl.git
Path: v1.0/map/pcr-bottleneck-coef.cwl Branch/Commit ID: v1.0 |
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env-wf2.cwl
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https://github.com/common-workflow-language/common-workflow-language.git
Path: v1.0/v1.0/env-wf2.cwl Branch/Commit ID: master |
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cnv_gridss
CNV GRIDSS calling |
https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git
Path: structuralvariants/cwl/subworkflows/cnv_gridss.cwl Branch/Commit ID: 1.1.3 |
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count-lines9-wf-noET.cwl
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https://github.com/common-workflow-language/cwl-v1.1.git
Path: tests/count-lines9-wf-noET.cwl Branch/Commit ID: master |
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collapsed_fastq_to_bam.cwl
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https://github.com/andurill/ACCESS-Pipeline.git
Path: workflows/marianas/collapsed_fastq_to_bam.cwl Branch/Commit ID: master |
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qiime2 DADA2 detect/correct sequence data
Option 1: DADA2 from https://docs.qiime2.org/2018.4/tutorials/moving-pictures/ |
https://github.com/duke-gcb/bespin-cwl.git
Path: packed/qiime2-step2-dada2.cwl Branch/Commit ID: qiime2-workflow Packed ID: qiime2-03-dada2.cwl |
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samtools_mpileup_subpipeline.cwl
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https://github.com/PMCC-BioinformaticsCore/janis-pipelines.git
Path: janis_pipelines/wgs_somatic/cwl/tools/samtools_mpileup_subpipeline.cwl Branch/Commit ID: master |
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Water body detection based on NDWI and the otsu threshold
Water bodies detection based on NDWI and otsu threshold applied to Sentinel-2 or Landsat-9 staged acquisitions |
https://github.com/eoap/mastering-app-package.git
Path: cwl-workflow/app-water-body.cwl Branch/Commit ID: main Packed ID: water-bodies |
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Non-Coding Bacterial Genes
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https://github.com/ncbi/pgap.git
Path: bacterial_noncoding/wf_bacterial_noncoding.cwl Branch/Commit ID: master |
