Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	wgs alignment and germline variant detection	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/germline_wgs.cwl Branch/Commit ID: d2c2f2eb846ae2e9cdcab46e3bb88e42126cb3f5
	revsortlcase.cwl	https://github.com/ResearchObject/runcrate.git Path: cwl/revsortlcase/revsortlcase.cwl Branch/Commit ID: 376f6b2c6332a4742d4512d6e1fb785a2f8b7285
	count-lines1-wf.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/count-lines1-wf.cwl Branch/Commit ID: 5c7799a145595323d0a8628be1fe0e24985e793a
	kmer_top_n_extract	https://github.com/ncbi/pgap.git Path: task_types/tt_kmer_top_n_extract.cwl Branch/Commit ID: 61e3752f1f5e2ee498fa024c235226f8580be942
	scatter-wf4.cwl#main	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/scatter-wf4.cwl Branch/Commit ID: dbc4c4c2ad30ed31367b4fbcc3bb4084fdcabaa2 Packed ID: main
	Run pindel on provided region	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/pindel_region.cwl Branch/Commit ID: da335d9963418f7bedd84cb2791a0df1b3165ffe
	Tumor-Only Detect Variants workflow	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/tumor_only_detect_variants.cwl Branch/Commit ID: 5cb188131f786ed33156e2f0e3dd63ab9c04245d
	Single-cell RNA-Seq Dimensionality Reduction Analysis Single-cell RNA-Seq Dimensionality Reduction Analysis Integrates multiple single-cell RNA-Seq datasets, reduces dimensionality using PCA.	https://github.com/datirium/workflows.git Path: workflows/sc-rna-reduce.cwl Branch/Commit ID: 7030da528559c7106d156284e50ff0ecedab0c4e
	Workflow to run pVACseq from detect_variants and rnaseq pipeline outputs	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/pvacseq.cwl Branch/Commit ID: b7d9ace34664d3cedb16f2512c8a6dc6debfc8ca
	prep.cwl	https://git.astron.nl/RD/LINC.git Path: workflows/linc_target/prep.cwl Branch/Commit ID: 035f66ec0f260628424c9621aed97f7cbf35e737