Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph count-lines1-wf-noET.cwl

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/count-lines1-wf-noET.cwl

Branch/Commit ID: main
workflow graph salmon_wf_se.cwl

https://github.com/pitagora-network/pitagora-cwl.git

Path: workflows/salmon/single_end/salmon_wf_se.cwl

Branch/Commit ID: master
workflow graph EMG QC workflow, (paired end version). Benchmarking with MG-RAST expt.

https://github.com/proteinswebteam/ebi-metagenomics-cwl.git

Path: workflows/emg-qc-paired.cwl

Branch/Commit ID: 5e82174
workflow graph spurious_annot pass2

https://github.com/ncbi/pgap.git

Path: spurious_annot/wf_spurious_annot_pass2.cwl

Branch/Commit ID: master
workflow graph SetParameterWorkflowMissing

This is a placeholder for a missing setting workflow.

 https://github.com/gammasim/workflows.git

Path: workflows/SetParameterWorkflowMissing.cwl

Branch/Commit ID: main
workflow graph CRAM_md5sum_checker_wrapper.cwl

This wraps the md5sum tool with a checker workflow that runs both the tool and a tool that performs verification of results

https://github.com/DataBiosphere/topmed-workflows.git

Path: CRAM-no-header-md5sum/CRAM_md5sum_checker_wrapper.cwl

Branch/Commit ID: 1.24.0
workflow graph EMG QC workflow, (paired end version). Benchmarking with MG-RAST expt.

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/emg-qc-paired.cwl

Branch/Commit ID: 5833078
workflow graph bams2gvcf.woBQSR_male_chrXY_wXTR.multisamples.cwl

https://github.com/ddbj/human-reseq.git

Path: Workflows/bams2gvcf.woBQSR_male_chrXY_wXTR.multisamples.cwl

Branch/Commit ID: master
workflow graph preprocess_vcf.cwl

This workflow will perform preprocessing steps on VCFs for the OxoG/Variantbam/Annotation workflow.

https://github.com/david4096/OxoG-Dockstore-Tools.git

Path: preprocess_vcf.cwl

Branch/Commit ID: develop
workflow graph cmsearch-multimodel.cwl

https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git

Path: workflows/cmsearch-multimodel.cwl

Branch/Commit ID: master