Explore Workflows

ATAC-seq 03 mapping - reads: SE

https://github.com/alexbarrera/GGR-cwl.git

Path: v1.0/ATAC-seq_pipeline/03-map-se-blacklist-removal.cwl

Branch/Commit ID: v1.0

https://github.com/common-workflow-language/common-workflow-language.git

Path: v1.0/v1.0/scatter-valuefrom-wf5.cwl

Branch/Commit ID: master

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/output-arrays-file-wf.cwl

Branch/Commit ID: main

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: tools/collate_unique_rRNA_headers.cwl

Branch/Commit ID: 0fed1c9

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: tools/SSU-from-tablehits.cwl

Branch/Commit ID: 930a2cf

This WPS workflow is designed to process ERA5 data, which is usually gathered as two sets of meteorological input grib files, atmosphere (3D data) and surface (2D data). This workflow does not include the geogrid step, that will need to be run separately. Required Inputs: * geo_em* input files (generated by geogrid) * 2 VTables, atmosphere and surface * 2 sets of Grib files, atmosphere and surface * 2 ungrib namelist files, atmosphere and surface * 1 metgrid namelist file Returns: * met_em* files for a single WRF simulation

https://github.com/UoMResearchIT/wrf_emep_cwl_linear_workflow.git

Path: workflows/wps_workflow.cwl

Branch/Commit ID: develop

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/cmsearch-multimodel.cwl

Branch/Commit ID: 0cd2d70

https://github.com/common-workflow-language/workflows.git

Path: workflows/kallisto-demo.cwl

Branch/Commit ID: master

https://github.com/UoMResearchIT/wrf_emep_cwl_linear_workflow.git

Path: workflows/geogrid_workflow.cwl

Branch/Commit ID: develop

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/strelka_and_post_processing.cwl

Branch/Commit ID: master