Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph binning.cwl

https://github.com/EBI-Metagenomics/CWL-binning.git

Path: workflows/binning.cwl

Branch/Commit ID: develop
workflow graph ST520106.cwl

https://github.com/Marco-Salvi/cwl-ro-crate.git

Path: ST520106.cwl

Branch/Commit ID: main
workflow graph CODEX analysis pipeline using Cytokit

https://github.com/hubmapconsortium/codex-pipeline.git

Path: steps/ometiff_second_stitching.cwl

Branch/Commit ID: cf68e50
workflow graph gpas_gatk4.2.4.1_mutect2_tumor_only_workflow.cwl

https://github.com/nci-gdc/gatk4_mutect2_cwl.git

Path: gatk4-mutect2-tumor-only-cwl/gpas_gatk4.2.4.1_mutect2_tumor_only_workflow.cwl

Branch/Commit ID: master
workflow graph VIRTUS.PE.cwl

https://github.com/yyoshiaki/VIRTUS.git

Path: workflow/VIRTUS.PE.cwl

Branch/Commit ID: master
workflow graph Workflow to run pVACseq from detect_variants and rnaseq pipeline outputs

https://github.com/apaul7/cancer-genomics-workflow.git

Path: definitions/subworkflows/pvacseq.cwl

Branch/Commit ID: low-vaf
workflow graph main-NA12878-platinum-chr20.cwl

https://github.com/BD2KGenomics/toil-workflows.git

Path: NA12878-platinum-chr20-workflow/main-NA12878-platinum-chr20.cwl

Branch/Commit ID: master
workflow graph qc_duplex

https://github.com/msk-access/qc_generation.git

Path: access_qc__packed.cwl

Branch/Commit ID: develop

Packed ID: qc_duplex_bam.cwl
workflow graph samtools_view_sam2bam

https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git

Path: structuralvariants/subworkflows/samtools_view_sam2bam.cwl

Branch/Commit ID: 3bb03c9b
workflow graph sc_atac_seq_prep_process_init.cwl

https://github.com/hubmapconsortium/multiome-rna-atac-pipeline.git

Path: sc-atac-seq-pipeline/steps/sc_atac_seq_prep_process_init.cwl

Branch/Commit ID: 68e0cc1